RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA772154", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA772154 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28421073 28421073 PRJNA772154_P_NODE_18266_length_252_cov_0.871508_g18081_i0 PRJNA772154 18266 252 0.871508 2.19620016 Fungi 4751 Fungi Fungi 57.8 9.35e-8   NR KAJ3232264.1 4814 g18081 i0 35.8 5.36904761904762 81 49 96.4 1 10 252 11 88 KAJ3232264.1 40S ribosomal protein [Chytriomyces hyalinus] diamond 1353 57.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
32487903 32487903 PRJNA772154_P_NODE_17779_length_253_cov_0.866667_g17594_i0 PRJNA772154 17779 253 0.866667 2.19266751 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 55.1 1.71e-6   NR KAG4102737.1 2767002 g17594 i0 42.9 0.74703557312253 63 33 74.7 1 189 1 26 85 KAG4102737.1 Metallo-dependent phosphatase [Neocallimastix lanati (nom. inval.)] diamond 189 55.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;