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contig_metadata

3 rows where bioproject = "PRJNA772154", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA772154 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27717107 27717107 PRJNA772154_P_NODE_21004_length_246_cov_0.901734_g20819_i0 PRJNA772154 21004 246 0.901734 2.21826564 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 70.5 6.51e-12   NR HET6747464.1 2973664 g20819 i0 65.3 0.597560975609756 49 17 59.8 0 149 3 1 49 HET6747464.1 type IV secretion system DNA-binding domain-containing protein [Candidatus Saccharimonadales bacterium] diamond 147 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28610367 28610367 PRJNA772154_P_NODE_18887_length_250_cov_0.881356_g18702_i0 PRJNA772154 18887 250 0.881356 2.20339 Candidatus Saccharimonas 1331051 Bacteria Bacteria 167 1.92e-47   NR HRC27857.1 1917697 g18702 i0 86.7 3.984 83 11 99.6 0 250 2 234 316 HRC27857.1 lysine--tRNA ligase [Candidatus Saccharimonas sp.] diamond 996 167 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32424504 32424504 PRJNA772154_P_NODE_21999_length_244_cov_0.912281_g21814_i0 PRJNA772154 21999 244 0.912281 2.22596564 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 54.7 9.53e-7   NR MDO4773977.1 2026720 g21814 i0 42.5 4.52459016393443 80 45 97.1 1 2 238 99 178 MDO4773977.1 glycerol-3-phosphate acyltransferase [Candidatus Saccharibacteria bacterium] diamond 1104 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;