contig_metadata
8 rows where bioproject = "PRJNA771359" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2023073 | 2023073 | PRJNA771359_S_NODE_522_length_435_cov_6.077889_g439_i0 | PRJNA771359 | 522 | 435 | 6.077889 | 26.43881715 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 699 | 0 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g439 | i0 | 95.833 | 521.597701149425 | 432 | 18 | 99 | 0 | 1 | 432 | 2683879 | 2683448 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 226895 | 699 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 3298247 | 3298247 | PRJNA771359_S_NODE_3343_length_183_cov_3.815068_g3260_i0 | PRJNA771359 | 3343 | 183 | 3.815068 | 6.98157444 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 117 | 5.45e-22 | NTclustered | gi|2511631678|gb|CP126123.1| | 70125 | g3260 | i0 | 78.919 | 68.6612021857923 | 185 | 30 | 99 | 8 | 2 | 183 | 1528848 | 1529026 | MAG: Nitrospira sp. isolate bin_003 chromosome, complete genome | blastn | 12565 | 117 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 5850592 | 5850592 | PRJNA771359_S_NODE_3385_length_182_cov_5.427586_g3302_i0 | PRJNA771359 | 3385 | 182 | 5.427586 | 9.87820652 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 309 | 8.32e-80 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g3302 | i0 | 97.253 | 159.978021978022 | 182 | 5 | 100 | 0 | 1 | 182 | 201368 | 201549 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 29116 | 309 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 7584807 | 7584807 | PRJNA771359_S_NODE_3146_length_189_cov_3.598684_g3063_i0 | PRJNA771359 | 3146 | 189 | 3.598684 | 6.80151276 | Nitrospira | 1234 | Bacteria | Bacteria | 350 | 5.14e-92 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g3063 | i0 | 100 | 319.772486772487 | 189 | 0 | 100 | 0 | 1 | 189 | 1278185 | 1278373 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 60437 | 350 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 9675495 | 9675495 | PRJNA771359_S_NODE_4008_length_168_cov_3.221374_g3925_i0 | PRJNA771359 | 4008 | 168 | 3.221374 | 5.41190832 | Nitrospira tepida | 2973512 | Bacteria | Bacteria | 211 | 2.2e-50 | NTclustered | gi|2526808154|emb|OX365700.1| | 2973512 | g3925 | i0 | 89.286 | 471.779761904762 | 168 | 18 | 100 | 0 | 1 | 168 | 1826314 | 1826481 | Nitrospira sp. DNF genome assembly, chromosome: NsDNF | blastn | 79259 | 211 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira tepida | ||
| 10951180 | 10951180 | PRJNA771359_S_NODE_769_length_362_cov_7.101538_g686_i0 | PRJNA771359 | 769 | 362 | 7.101538 | 25.70756756 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 462 | 1.34e-125 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g686 | i0 | 89.863 | 117.917127071823 | 365 | 30 | 100 | 7 | 1 | 362 | 1277631 | 1277271 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 42686 | 462 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 24973692 | 24973692 | PRJNA771359_S_NODE_5220_length_150_cov_2.548673_g5137_i0 | PRJNA771359 | 5220 | 150 | 2.548673 | 3.8230095 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 272 | 8.609999999999998e-69 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g5137 | i0 | 99.333 | 212.993333333333 | 150 | 1 | 100 | 0 | 1 | 150 | 199978 | 200127 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 31949 | 272 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 25433424 | 25433424 | PRJNA771359_S_NODE_3940_length_169_cov_6.446970_g3857_i0 | PRJNA771359 | 3940 | 169 | 6.44697 | 10.8953793 | Nitrospira | 1234 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g3857 | i0 | 100 | 116.343195266272 | 169 | 0 | 100 | 0 | 1 | 169 | 1278203 | 1278035 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 19662 | 313 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;