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contig_metadata

21 rows where bioproject = "PRJNA771359", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 21 ✖

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA771359 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
747050 747050 PRJNA771359_S_NODE_361_length_495_cov_16.858079_g283_i0 PRJNA771359 361 495 16.858079 83.44749105 Labilithrix luteola 1391654 Bacteria Bacteria 496 1.86e-135   NTclustered gi|913610804|gb|CP012333.1| 1391654 g283 i0 85.02 126.414141414141 494 66 99 7 6 495 7090555 7090066 Labilithrix luteola strain DSM 27648, complete genome blastn 62575 496 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
747055 747055 PRJNA771359_S_NODE_4121_length_166_cov_4.248062_g4038_i0 PRJNA771359 4121 166 4.248062 7.05178292 Nannocystis punicea 2995304 Bacteria Bacteria 178 2.2e-40   NTclustered gi|2415023655|gb|CP114040.1| 2995304 g4038 i0 94.068 69.2951807228916 118 6 70 1 1 117 11216857 11216974 Nannocystis poenicansa strain FL3 chromosome, complete genome blastn 11503 178 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis punicea
3298211 3298211 PRJNA771359_S_NODE_1223_length_304_cov_19.835206_g1140_i0 PRJNA771359 1223 304 19.835206 60.29902624 Labilithrix luteola 1391654 Bacteria Bacteria 387 6.839999999999998e-103   NTclustered gi|913610804|gb|CP012333.1| 1391654 g1140 i0 89.968 129.559210526316 309 17 99 10 3 302 3943049 3943352 Labilithrix luteola strain DSM 27648, complete genome blastn 39386 387 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
3298268 3298268 PRJNA771359_S_NODE_4403_length_161_cov_2.927419_g4320_i0 PRJNA771359 4403 161 2.927419 4.71314459 Sandaracinus amylolyticus 927083 Bacteria Bacteria 150 4.61e-32   NTclustered gi|816953346|gb|CP011125.1| 927083 g4320 i0 84.713 92.6211180124224 157 17 95 7 1 153 8617140 8617293 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 14912 150 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
3298282 3298282 PRJNA771359_S_NODE_763_length_363_cov_8.607362_g680_i0 PRJNA771359 763 363 8.607362 31.24472406 Labilithrix luteola 1391654 Bacteria Bacteria 577 4.589999999999998e-160   NTclustered gi|913610804|gb|CP012333.1| 1391654 g680 i0 95.317 142.867768595041 363 17 100 0 1 363 3944164 3943802 Labilithrix luteola strain DSM 27648, complete genome blastn 51861 577 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
10951121 10951121 PRJNA771359_S_NODE_1849_length_245_cov_10.581731_g1766_i0 PRJNA771359 1849 245 10.581731 25.92524095 Labilithrix luteola 1391654 Bacteria Bacteria 353 5.41e-93   NTclustered gi|913610804|gb|CP012333.1| 1391654 g1766 i0 93.004 179.689795918367 243 15 99 2 4 245 3942339 3942098 Labilithrix luteola strain DSM 27648, complete genome blastn 44024 353 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
11410581 11410581 PRJNA771359_S_NODE_4289_length_163_cov_4.087302_g4206_i0 PRJNA771359 4289 163 4.087302 6.66230226 Archangium 47 Bacteria Bacteria 171 3.59e-38   NTclustered gi|2809295724|gb|CP102578.1| 48 g4206 i0 86.42 262.865030674847 162 15 95 6 9 163 4475164 4475003 Archangium gephyra strain SDU49 chromosome, complete genome blastn 42847 171 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
14775929 14775929 PRJNA771359_S_NODE_2852_length_198_cov_35.142857_g2769_i0 PRJNA771359 2852 198 35.142857 69.58285686 Anaeromyxobacter sp. Fw109-5 404589 Bacteria Bacteria 176 9.76e-40   NTclustered gi|470482295|ref|NR_076524.1| 404589 g2769 i0 83.168 151.282828282828 202 25 99 7 1 197 215 18 Anaeromyxobacter sp. Fw109-5 strain Fw109-5 23S ribosomal RNA, complete sequence blastn 29954 176 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter sp. Fw109-5
15235268 15235268 PRJNA771359_S_NODE_792_length_359_cov_4.425466_g709_i0 PRJNA771359 792 359 4.425466 15.88742294 Anaeromyxobacter 161492 Bacteria Bacteria 220 8.81e-53   NTclustered gi|470477744|ref|NR_076406.1| 161493 g709 i0 84.034 296.827298050139 238 28 65 10 127 359 277 45 Anaeromyxobacter dehalogenans strain 2CP-C 23S ribosomal RNA gene, complete sequence blastn 106561 220 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter dehalogenans
16509662 16509662 PRJNA771359_S_NODE_1533_length_271_cov_48.632479_g1450_i0 PRJNA771359 1533 271 48.632479 131.79401809 root 1 Root_unresolved Root_unresolved 357 4.7e-94   NTclustered gi|169977285|emb|AM946600.1| 52 g1450 i0 90.476 146.247232472325 273 22 100 4 1 271 1786 2056 Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 blastn 39633 357 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
17784362 17784362 PRJNA771359_S_NODE_1394_length_287_cov_7.636000_g1311_i0 PRJNA771359 1394 287 7.636 21.91532 Sorangium 39643 Bacteria Bacteria 442 1.3499999999999993e-119   NTclustered gi|1566478966|gb|CP012672.1| 56 g1311 i0 94.444 167.09756097561 288 15 100 1 1 287 3691768 3691481 Sorangium cellulosum strain So ce836 chromosome, complete genome blastn 47957 442 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
17784369 17784369 PRJNA771359_S_NODE_194_length_645_cov_39.432566_g123_i0 PRJNA771359 194 645 39.432566 254.3400507 Nannocystis 53 Bacteria Bacteria 780 0   NTclustered gi|2244669|emb|X87286.1| 54 g123 i0 88.647 172.063565891473 643 70 99 3 1 640 1140 498 N.exedens 23S rRNA gene blastn 110981 780 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis exedens
19873782 19873782 PRJNA771359_S_NODE_1336_length_293_cov_16.902344_g1253_i0 PRJNA771359 1336 293 16.902344 49.52386792 Minicystis rosea 888845 Bacteria Bacteria 464 2.9399999999999994e-126   NTclustered gi|1127353251|gb|CP016211.1| 888845 g1253 i0 95.238 124.61433447099 294 12 100 2 1 293 770416 770124 Minicystis rosea strain DSM 24000 chromosome, complete genome blastn 36512 464 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
24973663 24973663 PRJNA771359_S_NODE_3600_length_177_cov_3.600000_g3517_i0 PRJNA771359 3600 177 3.6 6.372 Minicystis rosea 888845 Bacteria Bacteria 161 2.38e-35   NTclustered gi|1127353251|gb|CP016211.1| 888845 g3517 i0 85.093 46.3898305084746 161 20 89 4 20 177 770410 770569 Minicystis rosea strain DSM 24000 chromosome, complete genome blastn 8211 161 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
25433419 25433419 PRJNA771359_S_NODE_3540_length_179_cov_1.746479_g3457_i0 PRJNA771359 3540 179 1.746479 3.12619741 root 1 Root_unresolved Root_unresolved 148 1.8799999999999999e-31   NTclustered gi|169977285|emb|AM946600.1| 52 g3457 i0 83.436 54.6145251396648 163 24 89 2 18 177 1581 1419 Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 blastn 9776 148 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
25433439 25433439 PRJNA771359_S_NODE_820_length_355_cov_6.959119_g737_i0 PRJNA771359 820 355 6.959119 24.70487245 Sorangium 39643 Bacteria Bacteria 303 8.4e-78   NTclustered gi|507148211|ref|NR_103018.1| 56 g737 i0 87.085 278.757746478873 271 32 75 3 88 355 275 5 Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence blastn 98959 303 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
28411428 28411428 PRJNA771359_S_NODE_4846_length_155_cov_1.966102_g4763_i0 PRJNA771359 4846 155 1.966102 3.0474581 Haliangium sp. 2663208 Bacteria Bacteria 47.8 1.91e-4   NR HWN71616.1 2663208 g4763 i0 48.2 1.08387096774194 56 20 94.8 2 5 151 113 166 HWN71616.1 lysyl oxidase family protein [Haliangium sp.] diamond 168 47.8 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium sp.
29421487 29421487 PRJNA771359_S_NODE_2469_length_213_cov_1.960227_g2386_i0 PRJNA771359 2469 213 1.960227 4.17528351 Kofleriaceae bacterium 2212474 Bacteria Bacteria 67 7.09e-11   NR HSK02279.1 2212474 g2386 i0 56.3 2.02816901408451 48 20 66.2 1 213 73 263 310 HSK02279.1 lysyl oxidase family protein [Kofleriaceae bacterium] diamond 432 67 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
32645251 32645251 PRJNA771359_S_NODE_2040_length_232_cov_2.071795_g1957_i0 PRJNA771359 2040 232 2.071795 4.8065644 Myxococcota bacterium 2818507 Bacteria Bacteria 57 3e-7   NR HOA14037.1 2818507 g1957 i0 38.2 0.879310344827586 68 41 86.6 1 3 203 415 482 HOA14037.1 hypothetical protein [Myxococcota bacterium] diamond 204 57 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32834414 32834414 PRJNA771359_S_NODE_1200_length_307_cov_2.177778_g1117_i0 PRJNA771359 1200 307 2.177778 6.68577846 Myxococcales bacterium 2026763 Bacteria Bacteria 59.7 9.16e-8   NR MBT9555065.1 2026763 g1117 i0 45.3 1.5928338762215 64 34 62.5 1 199 8 121 183 MBT9555065.1 hypothetical protein [Myxococcales bacterium] diamond 489 59.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32865936 32865936 PRJNA771359_S_NODE_4500_length_160_cov_1.504065_g4417_i0 PRJNA771359 4500 160 1.504065 2.406504 Haliangium sp. 2663208 Bacteria Bacteria 72.8 8.27e-14   NR HWN71617.1 2663208 g4417 i0 51.9 1.9125 52 25 97.5 0 4 159 103 154 HWN71617.1 lysyl oxidase family protein [Haliangium sp.] diamond 306 72.8 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;