contig_metadata
8 rows where bioproject = "PRJNA771359" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1206705 | 1206705 | PRJNA771359_S_NODE_1001_length_328_cov_3.941581_g918_i0 | PRJNA771359 | 1001 | 328 | 3.941581 | 12.92838568 | Gemmatimonas | 173479 | Bacteria | Bacteria | 350 | 9.77e-92 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g918 | i0 | 86.322 | 615.271341463415 | 329 | 35 | 98 | 9 | 6 | 327 | 1582 | 1907 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 201809 | 350 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 3298249 | 3298249 | PRJNA771359_S_NODE_3483_length_180_cov_2.328671_g3400_i0 | PRJNA771359 | 3483 | 180 | 2.328671 | 4.1916078 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 209 | 8.56e-50 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g3400 | i0 | 87.709 | 302.694444444444 | 179 | 22 | 99 | 0 | 2 | 180 | 421701 | 421523 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 54485 | 209 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7125738 | 7125738 | PRJNA771359_S_NODE_1406_length_286_cov_4.128514_g1323_i0 | PRJNA771359 | 1406 | 286 | 4.128514 | 11.80755004 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 298 | 3.07e-76 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g1323 | i0 | 86.022 | 19.3006993006993 | 279 | 37 | 97 | 2 | 5 | 282 | 1102759 | 1103036 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 5520 | 298 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 8400307 | 8400307 | PRJNA771359_S_NODE_947_length_334_cov_2.451178_g864_i0 | PRJNA771359 | 947 | 334 | 2.451178 | 8.18693452 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 518 | 2.58e-142 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g864 | i0 | 94.627 | 38.5389221556886 | 335 | 16 | 100 | 2 | 1 | 334 | 3043244 | 3043577 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 12872 | 518 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 18598840 | 18598840 | PRJNA771359_S_NODE_995_length_329_cov_2.500000_g912_i0 | PRJNA771359 | 995 | 329 | 2.5 | 8.225 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 390 | 5.779999999999999e-104 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g912 | i0 | 88.45 | 7.06382978723404 | 329 | 31 | 100 | 2 | 1 | 329 | 3043662 | 3043983 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 2324 | 390 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 19873839 | 19873839 | PRJNA771359_S_NODE_4476_length_160_cov_2.544715_g4393_i0 | PRJNA771359 | 4476 | 160 | 2.544715 | 4.071544 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 213 | 5.75e-51 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g4393 | i0 | 91.613 | 125.03125 | 155 | 12 | 97 | 1 | 6 | 160 | 232524 | 232371 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 20005 | 213 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 22884455 | 22884455 | PRJNA771359_S_NODE_1778_length_251_cov_5.757009_g1695_i0 | PRJNA771359 | 1778 | 251 | 5.757009 | 14.45009259 | Gemmatimonas | 173479 | Bacteria | Bacteria | 331 | 2.6100000000000006e-86 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g1695 | i0 | 90.551 | 111.808764940239 | 254 | 19 | 99 | 4 | 3 | 251 | 571 | 318 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 28064 | 331 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 25433406 | 25433406 | PRJNA771359_S_NODE_2400_length_216_cov_4.296089_g2317_i0 | PRJNA771359 | 2400 | 216 | 4.296089 | 9.27955224 | Gemmatimonas | 173479 | Bacteria | Bacteria | 226 | 1.0599999999999999e-54 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g2317 | i0 | 87 | 12.0185185185185 | 200 | 26 | 93 | 0 | 16 | 215 | 299 | 100 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 2596 | 226 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;