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contig_metadata

21 rows where bioproject = "PRJNA771359" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA771359 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1206719 1206719 PRJNA771359_S_NODE_2341_length_219_cov_3.923077_g2258_i0 PRJNA771359 2341 219 3.923077 8.59153863 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 403 4.64e-108   NTclustered gi|219812771|gb|FJ552985.1| 282477 g2258 i0 100 99.0639269406393 218 0 99 0 1 218 80 297 Uncultured peritrich clone LTSP_EUKA_P1P06 18S ribosomal RNA, 18S-25/28S ribosomal RNA intergenic spacer, partial sequence blastn 21695 403 1 Eukaryota Sar   Ciliophora Oligohymenophorea       uncultured Peritrichia
1206721 1206721 PRJNA771359_S_NODE_2481_length_212_cov_11.685714_g2398_i0 PRJNA771359 2481 212 11.685714 24.77371368 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 387 4.5e-103   NTclustered gi|297664831|gb|GU586177.1| 768686 g2398 i0 99.528 98.1556603773585 212 1 100 0 1 212 551 340 Vorticella sp. 8 PPS-2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20809 387 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 8 PPS-2010
2023051 2023051 PRJNA771359_S_NODE_3382_length_182_cov_7.613793_g3299_i0 PRJNA771359 3382 182 7.613793 13.85710326 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 296 6.48e-76   NTclustered gi|512134943|gb|JX178902.1| 1295638 g3299 i0 96.154 99.6153846153846 182 5 100 2 1 182 1827 1648 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18130 296 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
5850545 5850545 PRJNA771359_S_NODE_1365_length_290_cov_29.079051_g1282_i0 PRJNA771359 1365 290 29.079051 84.3292479 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 494 3.71e-135   NTclustered gi|512134943|gb|JX178902.1| 1295638 g1282 i0 98.913 93.0034482758621 276 3 95 0 15 290 1450 1175 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26971 494 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
7125801 7125801 PRJNA771359_S_NODE_5166_length_151_cov_1.649123_g5083_i0 PRJNA771359 5166 151 1.649123 2.49017573 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 268 1.12e-67   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g5083 i0 98.675 61.3708609271523 151 2 100 0 1 151 692 842 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 9267 268 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
10135329 10135329 PRJNA771359_S_NODE_1828_length_247_cov_4.895238_g1745_i0 PRJNA771359 1828 247 4.895238 12.09123786 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 455 1.4600000000000002e-123   NTclustered gi|363412151|gb|JN120225.1| 1126581 g1745 i0 100 98.8623481781377 246 0 99 0 2 247 760 515 Vorticella citrina isolate 78vor5253c1wh6S1S2 18S ribosomal RNA gene, partial sequence blastn 24419 455 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella citrina
12226735 12226735 PRJNA771359_S_NODE_2550_length_209_cov_16.482558_g2467_i0 PRJNA771359 2550 209 16.482558 34.44854622 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 198 2.22e-46   NTclustered gi|512134965|gb|JX178924.1| 1295638 g2467 i0 88.889 54.7177033492823 162 17 77 1 1 161 1646 1485 Vorticella sp. 4 JG-2011 clone 24 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11436 198 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
12686382 12686382 PRJNA771359_S_NODE_4250_length_164_cov_1.543307_g4167_i0 PRJNA771359 4250 164 1.543307 2.53102348 Peniculida 33825 SAR_Eukaryotes SAR_Eukaryotes 137 3.67e-28   NTclustered gi|2496410955|gb|OQ869837.1| 2706568 g4167 i0 86.992 63.3536585365854 123 15 74 1 7 128 1642 1520 Frontonia atra isolate S240 large subunit ribosomal RNA gene, partial sequence blastn 10390 137 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Frontoniidae Frontonia Frontonia atra
16049672 16049672 PRJNA771359_S_NODE_4993_length_153_cov_1.318966_g4910_i0 PRJNA771359 4993 153 1.318966 2.01801798 Carchesium polypinum 168244 SAR_Eukaryotes SAR_Eukaryotes 244 1.93e-60   NTclustered gi|281192505|gb|FJ883553.1| 168244 g4910 i0 95.425 41.4183006535948 153 7 100 0 1 153 532 684 Carchesium polypinum alpha-tubulin gene, partial cds blastn 6337 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Carchesium Carchesium polypinum
21149658 21149658 PRJNA771359_S_NODE_637_length_389_cov_16.204545_g554_i0 PRJNA771359 637 389 16.204545 63.03568005 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 636 8.069999999999999e-178   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g554 i0 100 84.1156812339332 344 0 88 0 46 389 1839 1496 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 32721 636 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
24158412 24158412 PRJNA771359_S_NODE_3859_length_171_cov_2.350746_g3776_i0 PRJNA771359 3859 171 2.350746 4.01977566 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 316 4.6e-82   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3776 i0 100 85.5146198830409 171 0 100 0 1 171 1927 1757 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 14623 316 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
27053363 27053363 PRJNA771359_S_NODE_1642_length_264_cov_1.894273_g1559_i0 PRJNA771359 1642 264 1.894273 5.00088072 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 64.3 3.1e-11   NR XP_012651983.1 312017 g1559 i0 50.7 0.806818181818182 71 35 80.7 0 6 218 15 85 XP_012651983.1 hypothetical protein TTHERM_000784569 [Tetrahymena thermophila SB210] diamond 213 64.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
27189140 27189140 PRJNA771359_S_NODE_3782_length_173_cov_1.419118_g3699_i0 PRJNA771359 3782 173 1.419118 2.45507414 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00221   NR NP_049598.1 5908 g3699 i0 81.8 0.763005780346821 22 4 38.2 0 172 107 185 206 NP_049598.1 apocytochrome b [Tetrahymena pyriformis] diamond 132 45.4 0.993392070484582 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
27685426 27685426 PRJNA771359_S_NODE_2384_length_217_cov_1.577778_g2301_i0 PRJNA771359 2384 217 1.577778 3.42377826 Paramecium pentaurelia 43138 SAR_Eukaryotes SAR_Eukaryotes 68.6 2.59e-12   NR CAD8155930.1 43138 g2301 i0 55.4 0.898617511520737 65 28 89.9 1 215 21 16 79 CAD8155930.1 unnamed protein product [Paramecium pentaurelia] diamond 195 68.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
28158966 28158966 PRJNA771359_S_NODE_4145_length_166_cov_1.744186_g4062_i0 PRJNA771359 4145 166 1.744186 2.89534876 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 93.6 2.62e-22   NR CAG9318382.1 1481888 g4062 i0 75.9 0.975903614457831 54 13 97.6 0 162 1 52 105 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 162 93.6 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
28853151 28853151 PRJNA771359_S_NODE_2668_length_205_cov_1.428571_g2585_i0 PRJNA771359 2668 205 1.428571 2.92857055 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.21e-10   NR CAD8069000.1 65129 g2585 i0 61.9 2.75121951219512 63 24 92.2 0 204 16 250 312 CAD8069000.1 unnamed protein product [Paramecium sonneborni] diamond 564 65.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
28979834 28979834 PRJNA771359_S_NODE_4268_length_164_cov_1.204724_g4185_i0 PRJNA771359 4268 164 1.204724 1.97574736 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00145   NR CAD8135162.1 43137 g4185 i0 38.5 0.951219512195122 52 30 95.1 1 2 157 736 785 CAD8135162.1 unnamed protein product [Paramecium octaurelia] diamond 156 45.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
29074573 29074573 PRJNA771359_S_NODE_3228_length_187_cov_1.033333_g3145_i0 PRJNA771359 3228 187 1.033333 1.93233271 Thuricola similis 2784598 SAR_Eukaryotes SAR_Eukaryotes 78.2 5.5e-15   NR YP_010147331.1 2784598 g3145 i0 83.3 0.770053475935829 48 8 77 0 3 146 335 382 YP_010147331.1 cytochrome c oxidase subunit 1 [Thuricola similis] diamond 144 78.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vaginicolidae Thuricola Thuricola similis
29494405 29494405 PRJNA771359_S_NODE_3450_length_181_cov_1.340278_g3367_i0 PRJNA771359 3450 181 1.340278 2.42590318 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 40.8 0.0283   NR XP_012652362.1 312017 g3367 i0 56.8 1.83977900552486 37 16 61.3 0 137 27 17 53 XP_012652362.1 hypothetical protein TTHERM_000294739 [Tetrahymena thermophila SB210] diamond 333 40.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29999817 29999817 PRJNA771359_S_NODE_4271_length_164_cov_1.181102_g4188_i0 PRJNA771359 4271 164 1.181102 1.93700728 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.16e-8   NR CAD8084070.1 65129 g4188 i0 52.9 15.1646341463415 51 24 93.3 0 164 12 206 256 CAD8084070.1 unnamed protein product [Paramecium sonneborni] diamond 2487 60.1 0.993344425956739 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
30401312 30401312 PRJNA771359_S_NODE_3453_length_181_cov_1.340278_g3370_i0 PRJNA771359 3453 181 1.340278 2.42590318 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 71.6 1.06e-12   NR CAD8044685.1 5886 g3370 i0 61.8 1.8232044198895 55 21 91.2 0 180 16 214 268 CAD8044685.1 unnamed protein product, partial [Paramecium primaurelia] diamond 330 71.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;