RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA771359" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA771359 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9675493 9675493 PRJNA771359_S_NODE_3948_length_169_cov_3.772727_g3865_i0 PRJNA771359 3948 169 3.772727 6.37590863 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 91.6 2.99e-14   NTclustered gi|2575820357|emb|OY730476.1| 2053570 g3865 i0 83.019 0.810650887573965 106 13 61 5 13 115 3635710 3635607 MAG: Candidatus Latescibacteria bacterium isolate 667a1def-a863-4bf2-9b98-94036fb31650 genome assembly, chromosome: 1 blastn 137 91.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
16509677 16509677 PRJNA771359_S_NODE_2833_length_199_cov_2.895062_g2750_i0 PRJNA771359 2833 199 2.895062 5.76117338 Bacteria 2 Bacteria Bacteria 165 2.13e-36   NTclustered gi|2531976039|emb|OY282377.1| 199737 g2750 i0 83.708 276.236180904523 178 25 88 4 1 175 3966008 3966184 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 54971 165 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
17784389 17784389 PRJNA771359_S_NODE_374_length_487_cov_14.271111_g296_i0 PRJNA771359 374 487 14.271111 69.50031057 Bacteria 2 Bacteria Bacteria 202 4.459999999999999e-47   NTclustered gi|2518550840|emb|OX638317.1| 199737 g296 i0 78.223 278.88501026694 349 53 71 14 144 487 3962296 3962626 MAG: uncultured Latescibacteria bacterium isolate cbbe8a84-e08a-4d06-a76e-2eb930d8ff24 genome assembly, chromosome: 1 blastn 135817 202 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;