contig_metadata
17 rows where bioproject = "PRJNA771359", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3758510 | 3758510 | PRJNA771359_S_NODE_3923_length_170_cov_2.052632_g3840_i0 | PRJNA771359 | 3923 | 170 | 2.052632 | 3.4894744 | Bdellovibrio | 958 | Bacteria | Bacteria | 183 | 4.829999999999999e-42 | NTclustered | gi|2800917394|gb|CP168972.1| | 959 | g3840 | i0 | 86.207 | 466.052941176471 | 174 | 18 | 99 | 3 | 1 | 168 | 750465 | 750292 | Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome | blastn | 79229 | 183 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 5850537 | 5850537 | PRJNA771359_S_NODE_105_length_881_cov_10.978673_g29_i1 | PRJNA771359 | 105 | 881 | 10.978673 | 96.72210913 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g29 | i1 | 83.855 | 192.797956867196 | 830 | 118 | 98 | 14 | 1 | 823 | 1677275 | 1678095 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 169855 | 776 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 5850553 | 5850553 | PRJNA771359_S_NODE_1725_length_255_cov_2.183486_g1642_i0 | PRJNA771359 | 1725 | 255 | 2.183486 | 5.5678893 | Pseudobdellovibrio exovorus | 453816 | Bacteria | Bacteria | 198 | 2.81e-46 | NTclustered | gi|469929247|gb|CP003537.1| | 1184267 | g1642 | i0 | 81.609 | 1.02352941176471 | 261 | 28 | 100 | 15 | 1 | 255 | 878462 | 878708 | Bdellovibrio exovorus JSS, complete genome | blastn | 261 | 198 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 7125772 | 7125772 | PRJNA771359_S_NODE_3386_length_182_cov_4.903448_g3303_i0 | PRJNA771359 | 3386 | 182 | 4.903448 | 8.92427536 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 270 | 3.93e-68 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g3303 | i0 | 93.407 | 177.884615384615 | 182 | 12 | 100 | 0 | 1 | 182 | 816313 | 816132 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 32375 | 270 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 8400293 | 8400293 | PRJNA771359_S_NODE_4987_length_153_cov_1.327586_g4904_i0 | PRJNA771359 | 4987 | 153 | 1.327586 | 2.03120658 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 272 | 8.84e-69 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g4904 | i0 | 98.693 | 6.7843137254902 | 153 | 2 | 100 | 0 | 1 | 153 | 511076 | 510924 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 1038 | 272 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 8859932 | 8859932 | PRJNA771359_S_NODE_2707_length_203_cov_20.096386_g2624_i0 | PRJNA771359 | 2707 | 203 | 20.096386 | 40.79566358 | Bdellovibrio | 958 | Bacteria | Bacteria | 348 | 2.0100000000000006e-91 | NTclustered | gi|2524301767|gb|OR186335.1| | 28201 | g2624 | i0 | 98.477 | 97.4088669950739 | 197 | 3 | 97 | 0 | 7 | 203 | 242 | 438 | Bdellovibrio sp. strain YBD-1 16S ribosomal RNA gene, partial sequence | blastn | 19774 | 348 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 8859947 | 8859947 | PRJNA771359_S_NODE_4167_length_165_cov_8.585938_g4084_i0 | PRJNA771359 | 4167 | 165 | 8.585938 | 14.1667977 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 261 | 2.11e-65 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g4084 | i0 | 95.181 | 35.3212121212121 | 166 | 6 | 100 | 2 | 1 | 165 | 498 | 334 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 5828 | 261 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 13960716 | 13960716 | PRJNA771359_S_NODE_311_length_535_cov_9.228916_g234_i0 | PRJNA771359 | 311 | 535 | 9.228916 | 49.3747006 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 732 | 0 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g234 | i0 | 94.351 | 88.8841121495327 | 478 | 25 | 89 | 2 | 1 | 477 | 1258 | 1734 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 47553 | 732 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 16049671 | 16049671 | PRJNA771359_S_NODE_493_length_441_cov_11.841584_g410_i0 | PRJNA771359 | 493 | 441 | 11.841584 | 52.22138544 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 595 | 1.5699999999999995e-165 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g410 | i0 | 90.971 | 230.138321995465 | 443 | 38 | 100 | 2 | 1 | 441 | 666800 | 666358 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 101491 | 595 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 22424326 | 22424326 | PRJNA771359_S_NODE_2038_length_232_cov_2.369231_g1955_i0 | PRJNA771359 | 2038 | 232 | 2.369231 | 5.49661592 | Bdellovibrio sp. HCB288 | 3394355 | Bacteria | Bacteria | 174 | 4.24e-39 | NTclustered | gi|2895994964|gb|CP178619.1| | 3394355 | g1955 | i0 | 82.673 | 243.137931034483 | 202 | 29 | 87 | 5 | 24 | 221 | 574849 | 574650 | Bdellovibrio sp. HCB288 chromosome, complete genome | blastn | 56408 | 174 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB288 | ||
| 22884457 | 22884457 | PRJNA771359_S_NODE_2058_length_231_cov_5.247423_g1975_i0 | PRJNA771359 | 2058 | 231 | 5.247423 | 12.12154713 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 320 | 5.12e-83 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g1975 | i0 | 91.775 | 154.978354978355 | 231 | 18 | 99 | 1 | 1 | 230 | 325 | 95 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 35800 | 320 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 22884482 | 22884482 | PRJNA771359_S_NODE_4678_length_157_cov_4.008333_g4595_i0 | PRJNA771359 | 4678 | 157 | 4.008333 | 6.29308281 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 255 | 9.2e-64 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g4595 | i0 | 96.154 | 99.4968152866242 | 156 | 6 | 99 | 0 | 2 | 157 | 1872 | 1717 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 15621 | 255 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 24158392 | 24158392 | PRJNA771359_S_NODE_1439_length_281_cov_6.118852_g1356_i0 | PRJNA771359 | 1439 | 281 | 6.118852 | 17.19397412 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 381 | 2.909999999999999e-101 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g1356 | i0 | 91.135 | 193.822064056939 | 282 | 23 | 100 | 2 | 1 | 281 | 325 | 45 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 54464 | 381 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 24158419 | 24158419 | PRJNA771359_S_NODE_479_length_445_cov_11.311275_g396_i0 | PRJNA771359 | 479 | 445 | 11.311275 | 50.33517375 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g396 | i0 | 93.258 | 326.543820224719 | 445 | 30 | 100 | 0 | 1 | 445 | 1364 | 920 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 145312 | 656 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 24973666 | 24973666 | PRJNA771359_S_NODE_3700_length_175_cov_1.239130_g3617_i0 | PRJNA771359 | 3700 | 175 | 1.23913 | 2.1684775 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 215 | 1.78e-51 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g3617 | i0 | 89.017 | 208.662857142857 | 173 | 19 | 99 | 0 | 1 | 173 | 512410 | 512238 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 36516 | 215 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 24973678 | 24973678 | PRJNA771359_S_NODE_420_length_467_cov_7.016279_g134_i1 | PRJNA771359 | 420 | 467 | 7.016279 | 32.76602293 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 595 | 1.6699999999999995e-165 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g134 | i1 | 92.927 | 98.2955032119914 | 410 | 28 | 96 | 1 | 1 | 409 | 3447207 | 3446798 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 45904 | 595 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 29484556 | 29484556 | PRJNA771359_S_NODE_4150_length_166_cov_1.503876_g4067_i0 | PRJNA771359 | 4150 | 166 | 1.503876 | 2.49643416 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 92 | 4.13e-20 | NR | MCB0368368.1 | 2053517 | g4067 | i0 | 76.4 | 0.993975903614458 | 55 | 13 | 99.4 | 0 | 165 | 1 | 87 | 141 | MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 165 | 92 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;