RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA771359", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 6 ✖

tax_clade 1

  • Discoba · 6 ✖

bioproject 1

  • PRJNA771359 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2023038 2023038 PRJNA771359_S_NODE_2582_length_208_cov_7.251462_g2499_i0 PRJNA771359 2582 208 7.251462 15.08304096 Neobodo designis 312471 Euglenozoa other_Eukaryota 333 5.809999999999999e-87   NTclustered gi|197723537|gb|EF681922.2| 312471 g2499 i0 95.673 158.9375 208 8 100 1 1 208 1221 1015 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 33059 333 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
3758509 3758509 PRJNA771359_S_NODE_3903_length_170_cov_16.015038_g3820_i0 PRJNA771359 3903 170 16.015038 27.2255646 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 217 4.76e-52   NTclustered gi|2414483|emb|Y00055.1| 5656 g3820 i0 89.941 120.7 169 16 99 1 2 170 7029 6862 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 20519 219 0.990867579908676 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
3758520 3758520 PRJNA771359_S_NODE_503_length_438_cov_4.201995_g420_i0 PRJNA771359 503 438 4.201995 18.4047381 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 549 1.2299999999999994e-151   NTclustered gi|2414483|emb|Y00055.1| 5656 g420 i0 89.213 142.58904109589 445 40 100 7 1 438 6692 6249 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 62454 549 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
18598805 18598805 PRJNA771359_S_NODE_3495_length_180_cov_1.405594_g3412_i0 PRJNA771359 3495 180 1.405594 2.5300692 uncultured marine diplonemid 547051 Euglenozoa other_Eukaryota 67.6 5.45e-7   NTclustered gi|223047901|gb|FJ032685.1| 547051 g3412 i0 100 0.9 36 0 20 0 99 134 1330 1365 Uncultured marine diplonemid clone Ma131_1A46 28S ribosomal RNA gene, partial sequence blastn 162 67.6 1 Eukaryota Discoba   Euglenozoa Diplonemea       uncultured marine diplonemid
25433434 25433434 PRJNA771359_S_NODE_500_length_439_cov_5.373134_g417_i0 PRJNA771359 500 439 5.373134 23.58805826 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 568 3.41e-157   NTclustered gi|2414483|emb|Y00055.1| 5656 g417 i0 89.978 143.765375854214 449 32 100 7 1 439 6694 6249 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 63113 568 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
28979833 28979833 PRJNA771359_S_NODE_2288_length_222_cov_1.643243_g2205_i0 PRJNA771359 2288 222 1.643243 3.64799946 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 44.3 0.00826   NR KAJ9452651.1 91374 g2205 i0 31 1.17567567567568 87 41 94.6 3 12 221 1742 1826 KAJ9452651.1 Laminin subunit alpha [Diplonema papillatum] diamond 261 44.3 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;