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contig_metadata

15 rows where bioproject = "PRJNA771359" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 15 ✖

bioproject 1

  • PRJNA771359 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2023038 2023038 PRJNA771359_S_NODE_2582_length_208_cov_7.251462_g2499_i0 PRJNA771359 2582 208 7.251462 15.08304096 Neobodo designis 312471 Euglenozoa other_Eukaryota 333 5.809999999999999e-87   NTclustered gi|197723537|gb|EF681922.2| 312471 g2499 i0 95.673 158.9375 208 8 100 1 1 208 1221 1015 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 33059 333 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
3758509 3758509 PRJNA771359_S_NODE_3903_length_170_cov_16.015038_g3820_i0 PRJNA771359 3903 170 16.015038 27.2255646 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 217 4.76e-52   NTclustered gi|2414483|emb|Y00055.1| 5656 g3820 i0 89.941 120.7 169 16 99 1 2 170 7029 6862 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 20519 219 0.990867579908676 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
3758520 3758520 PRJNA771359_S_NODE_503_length_438_cov_4.201995_g420_i0 PRJNA771359 503 438 4.201995 18.4047381 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 549 1.2299999999999994e-151   NTclustered gi|2414483|emb|Y00055.1| 5656 g420 i0 89.213 142.58904109589 445 40 100 7 1 438 6692 6249 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 62454 549 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
5035081 5035081 PRJNA771359_S_NODE_1764_length_252_cov_6.083721_g1681_i0 PRJNA771359 1764 252 6.083721 15.33097692 Naegleria 5761 Heterolobosea other_Eukaryota 399 7.079999999999999e-107   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1681 i0 95.238 10.4007936507937 252 12 100 0 1 252 5541 5792 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2621 399 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7584795 7584795 PRJNA771359_S_NODE_1886_length_242_cov_4.507317_g1803_i0 PRJNA771359 1886 242 4.507317 10.90770714 Naegleria 5761 Heterolobosea other_Eukaryota 431 2.4e-116   NTclustered gi|2651357798|gb|PP174311.1| 37103 g1803 i0 98.76 28.2685950413223 242 3 100 0 1 242 3296 3537 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6841 431 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
8400261 8400261 PRJNA771359_S_NODE_3067_length_192_cov_1.490323_g2984_i0 PRJNA771359 3067 192 1.490323 2.86142016 Naegleria jadini 51636 Heterolobosea other_Eukaryota 344 2.44e-90   NTclustered gi|38606346|gb|AY376154.1| 51636 g2984 i0 98.964 24.3333333333333 193 1 100 1 1 192 356 164 Naegleria jadini isolate 7858 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 4672 344 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jadini
17325388 17325388 PRJNA771359_S_NODE_3894_length_171_cov_1.141791_g3811_i0 PRJNA771359 3894 171 1.141791 1.95246261 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 291 2.79e-74   NTclustered gi|11466174|ref|NC_002573.1| 5762 g3811 i0 97.11 13.8070175438596 173 3 100 1 1 171 1778 1950 Naegleria gruberi mitochondrion, complete genome blastn 2361 291 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18598805 18598805 PRJNA771359_S_NODE_3495_length_180_cov_1.405594_g3412_i0 PRJNA771359 3495 180 1.405594 2.5300692 uncultured marine diplonemid 547051 Euglenozoa other_Eukaryota 67.6 5.45e-7   NTclustered gi|223047901|gb|FJ032685.1| 547051 g3412 i0 100 0.9 36 0 20 0 99 134 1330 1365 Uncultured marine diplonemid clone Ma131_1A46 28S ribosomal RNA gene, partial sequence blastn 162 67.6 1 Eukaryota Discoba   Euglenozoa Diplonemea       uncultured marine diplonemid
19058516 19058516 PRJNA771359_S_NODE_735_length_367_cov_3.787879_g652_i0 PRJNA771359 735 367 3.787879 13.90151593 Naegleria 5761 Heterolobosea other_Eukaryota 595 1.2799999999999998e-165   NTclustered gi|2618963742|gb|OR769034.1| 5762 g652 i0 95.913 38.3351498637602 367 15 100 0 1 367 4101 4467 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 14069 595 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22424349 22424349 PRJNA771359_S_NODE_3278_length_185_cov_2.743243_g3195_i0 PRJNA771359 3278 185 2.743243 5.07499955 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 337 3.89e-88   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g3195 i0 99.459 13.1189189189189 185 1 100 0 1 185 2143 2327 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2427 337 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22424353 22424353 PRJNA771359_S_NODE_3518_length_179_cov_4.697183_g3435_i0 PRJNA771359 3518 179 4.697183 8.40795757 uncultured Naegleria 229031 Heterolobosea other_Eukaryota 320 3.76e-83   NTclustered gi|2206187027|gb|OM946703.1| 229031 g3435 i0 100 97.4245810055866 173 0 97 0 7 179 1 173 Uncultured Naegleria clone STP_A-OC-29 small subunit ribosomal RNA gene, partial sequence blastn 17439 320 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae   uncultured Naegleria
22424374 22424374 PRJNA771359_S_NODE_558_length_418_cov_3.278215_g475_i0 PRJNA771359 558 418 3.278215 13.7029387 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 640 6.749999999999999e-179   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g475 i0 94.286 92.5645933014354 420 21 100 3 1 418 719 1137 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 38692 640 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
25433423 25433423 PRJNA771359_S_NODE_3880_length_171_cov_1.738806_g3797_i0 PRJNA771359 3880 171 1.738806 2.97335826 Naegleria 5761 Heterolobosea other_Eukaryota 279 6.03e-71   NTclustered gi|2618963742|gb|OR769034.1| 5762 g3797 i0 96.45 15.2222222222222 169 6 99 0 3 171 3711 3879 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2603 279 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25433434 25433434 PRJNA771359_S_NODE_500_length_439_cov_5.373134_g417_i0 PRJNA771359 500 439 5.373134 23.58805826 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 568 3.41e-157   NTclustered gi|2414483|emb|Y00055.1| 5656 g417 i0 89.978 143.765375854214 449 32 100 7 1 439 6694 6249 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 63113 568 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
28979833 28979833 PRJNA771359_S_NODE_2288_length_222_cov_1.643243_g2205_i0 PRJNA771359 2288 222 1.643243 3.64799946 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 44.3 0.00826   NR KAJ9452651.1 91374 g2205 i0 31 1.17567567567568 87 41 94.6 3 12 221 1742 1826 KAJ9452651.1 Laminin subunit alpha [Diplonema papillatum] diamond 261 44.3 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;