RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA771359", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 9 ✖

tax_clade 1

  • Amoebozoa · 9 ✖

bioproject 1

  • PRJNA771359 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
747051 747051 PRJNA771359_S_NODE_3841_length_171_cov_7.761194_g3758_i0 PRJNA771359 3841 171 7.761194 13.27164174 Cavenderia fasciculata 261658 Evosea other_Eukaryota 250 4.73e-62   NTclustered gi|470237391|ref|XM_004350602.1| 261658 g3758 i0 92.982 99.9239766081871 171 12 100 0 1 171 393 223 Cavenderia fasciculata actin (DFA_11706), partial mRNA blastn 17087 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
3298221 3298221 PRJNA771359_S_NODE_1843_length_246_cov_1.325359_g1760_i0 PRJNA771359 1843 246 1.325359 3.26038314 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 153 3.88e-41   NR AAA33205.1 44689 g1760 i0 89 10 82 9 100 0 246 1 458 539 AAA33205.1 elongation factor 2 [Dictyostelium discoideum] diamond 2460 154 0.993506493506494 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5035091 5035091 PRJNA771359_S_NODE_2944_length_195_cov_2.069620_g2861_i0 PRJNA771359 2944 195 2.06962 4.035759 Flamella 490353 Evosea other_Eukaryota 359 8.87e-95   NTclustered gi|163943979|gb|EU186023.1| 490516 g2861 i0 100 99.4923076923077 194 0 99 0 2 195 928 735 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 19401 359 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
13500771 13500771 PRJNA771359_S_NODE_2091_length_230_cov_2.844560_g2008_i0 PRJNA771359 2091 230 2.84456 6.542488 Dictyostelium purpureum 5786 Evosea other_Eukaryota 116 2.54e-30   NR XP_003283628.1 5786 g2008 i0 72 4.89130434782609 75 21 97.8 0 3 227 48 122 XP_003283628.1 40S ribosomal protein S6 [Dictyostelium purpureum] diamond 1125 116 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19873805 19873805 PRJNA771359_S_NODE_2496_length_212_cov_1.205714_g2413_i0 PRJNA771359 2496 212 1.205714 2.55611368 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 125 1.4099999999999998e-31   NR PRP84231.1 1890364 g2413 i0 94.3 1.9811320754717 70 4 99.1 0 1 210 973 1042 PRP84231.1 sensor histidine kinase/response regulator [Planoprotostelium fungivorum] diamond 420 125 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
24973645 24973645 PRJNA771359_S_NODE_2280_length_222_cov_2.486486_g2197_i0 PRJNA771359 2280 222 2.486486 5.51999892 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 132 1.26e-36   NR KAF2070957.1 133409 g2197 i0 80.6 8.7027027027027 72 14 97.3 0 220 5 8 79 KAF2070957.1 hypothetical protein CYY_007730 [Polysphondylium violaceum] diamond 1932 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
24973679 24973679 PRJNA771359_S_NODE_4320_length_163_cov_1.230159_g4237_i0 PRJNA771359 4320 163 1.230159 2.00515917 Heterostelium album 2086695 Evosea other_Eukaryota 62.1 2.26e-5   NTclustered gi|1160575580|ref|XM_020582530.1| 670386 g4237 i0 85.246 1.23312883435583 61 7 37 2 52 111 448 507 Polysphondylium pallidum PN500 S60 ribosomal protein L34 (rpl34), partial mRNA blastn 201 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
29927086 29927086 PRJNA771359_S_NODE_431_length_462_cov_1.637647_g350_i0 PRJNA771359 431 462 1.637647 7.56592914 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 133 2.02e-33   NR PRP74799.1 1890364 g350 i0 52.7 0.850649350649351 131 59 85.1 1 459 67 387 514 PRP74799.1 actin binding protein [Planoprotostelium fungivorum] diamond 393 133 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32392838 32392838 PRJNA771359_S_NODE_2839_length_199_cov_2.129630_g2756_i0 PRJNA771359 2839 199 2.12963 4.2379637 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 98.6 1.13e-23   NR KAH3757673.1 1580589 g2756 i0 64.6 4.95979899497487 65 23 98 0 195 1 34 98 KAH3757673.1 60S ribosomal protein L10a [Pelomyxa schiedti] diamond 987 98.6 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;