RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770826", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18598721 18598721 PRJNA770826_P_NODE_5635_length_355_cov_2.601307_g5464_i0 PRJNA770826 5635 355 2.601307 9.23463985 Thermoproteota archaeon 2056631 Archaea Archaea 168 1.21e-45   NR MFC1755240.1 2056631 g5464 i0 66.1 2.99154929577465 118 40 99.7 0 355 2 475 592 MFC1755240.1 pyruvate, phosphate dikinase [Thermoproteota archaeon] diamond 1062 168 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31168433 31168433 PRJNA770826_P_NODE_11215_length_241_cov_1.062500_g11044_i0 PRJNA770826 11215 241 1.0625 2.560625 root 1 Root_unresolved Root_unresolved 58.9 7.16e-8   NR MCC6005138.1 1961369 g11044 i0 61.9 1.07053941908714 42 16 52.3 0 141 16 49 90 MCC6005138.1 ankyrin repeat domain-containing protein [Thermofilum sp.] diamond 258 59.3 0.993254637436762 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae Thermofilum Thermofilum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;