RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770826" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29326854 29326854 PRJNA770826_P_NODE_43969_length_162_cov_0.858407_g43798_i0 PRJNA770826 43969 162 0.858407 1.39061934 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 41.6 0.0314   NR HSA35153.1 1906667 g43798 i0 74.1 0.5 27 7 50 0 68 148 295 321 HSA35153.1 AAA family ATPase [Methanomassiliicoccales archaeon] diamond 81 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
29390239 29390239 PRJNA770826_P_NODE_24269_length_169_cov_0.866667_g24098_i0 PRJNA770826 24269 169 0.866667 1.46466723 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 69.7 4.26e-12   NR MFL2974845.1 2670411 g24098 i0 56.6 8.16568047337278 53 23 94.1 0 159 1 628 680 MFL2974845.1 methionine--tRNA ligase [Candidatus Thalassarchaeaceae archaeon] diamond 1380 69.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;