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contig_metadata

24 rows where bioproject = "PRJNA770826" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5850450 5850450 PRJNA770826_P_NODE_33585_length_165_cov_1.344828_g33414_i0 PRJNA770826 33585 165 1.344828 2.2189662 Desulfatibacillum aliphaticivorans 218208 Bacteria Bacteria 56.5 0.001   NTclustered gi|218759244|gb|CP001322.1| 218208 g33414 i0 100 0.181818181818182 30 0 18 0 43 72 6259405 6259434 Desulfatibacillum aliphaticivorans strain AK-01, complete genome blastn 30 56.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfatibacillaceae Desulfatibacillum Desulfatibacillum aliphaticivorans
8859870 8859870 PRJNA770826_P_NODE_16087_length_202_cov_1.019608_g15916_i0 PRJNA770826 16087 202 1.019608 2.05960816 Desulfobacterales bacterium 2044940 Bacteria Bacteria 74.7 1.12e-13   NR MCG8614935.1 2044940 g15916 i0 53.1 0.95049504950495 64 26 89.1 1 21 200 22 85 MCG8614935.1 hydroxylamine reductase [Desulfobacterales bacterium] diamond 192 74.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
23699817 23699817 PRJNA770826_P_NODE_17059_length_196_cov_1.061224_g16888_i0 PRJNA770826 17059 196 1.061224 2.07999904 Syntrophotalea acetylenica 29542 Bacteria Bacteria 119 1.65e-22   NTclustered gi|1109565244|gb|CP015455.1| 29542 g16888 i0 79.096 4.46428571428571 177 33 89 4 20 194 2598569 2598743 Syntrophotalea acetylenica strain DSM 3246 chromosome, complete genome blastn 875 119 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Syntrophotaleaceae Syntrophotalea Syntrophotalea acetylenica
26736325 26736325 PRJNA770826_P_NODE_33961_length_165_cov_0.896552_g33790_i0 PRJNA770826 33961 165 0.896552 1.4793108 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 74.3 9.31e-14   NR MDA3895979.1 2049433 g33790 i0 68.5 0.981818181818182 54 17 98.2 0 162 1 130 183 MDA3895979.1 aldehyde dehydrogenase [Desulfobacteraceae bacterium] diamond 162 74.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
26768427 26768427 PRJNA770826_P_NODE_5101_length_376_cov_8.562691_g4930_i0 PRJNA770826 5101 376 8.562691 32.19571816 Desulfocurvus vexinensis 399548 Bacteria Bacteria 97.1 1.5899999999999995e-23   NR WP_028587017.1 399548 g4930 i0 53.5 0.686170212765957 86 37 67 2 293 42 4 88 WP_028587017.1 RNA recognition motif domain-containing protein [Desulfocurvus vexinensis] diamond 258 97.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfocurvus Desulfocurvus vexinensis
27189122 27189122 PRJNA770826_P_NODE_19262_length_184_cov_2.311111_g19091_i0 PRJNA770826 19262 184 2.311111 4.25244424 root 1 Root_unresolved Root_unresolved 63.2 1.44e-10   NR MEI6313473.1 48412 g19091 i0 50 3.53804347826087 54 25 84.8 1 157 2 89 142 MEI6313473.1 WSC domain-containing protein [Syntrophus sp. (in: bacteria)] diamond 651 63.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae Syntrophus Syntrophus sp. (in: bacteria)
27315883 27315883 PRJNA770826_P_NODE_24943_length_169_cov_0.866667_g24772_i0 PRJNA770826 24943 169 0.866667 1.46466723 Bacteria 2 Bacteria Bacteria 47.4 3.26e-4   NR WP_291330964.1 885 g24772 i0 40 1.79289940828402 55 33 97.6 0 166 2 593 647 WP_291330964.1 response regulator [Desulfovibrio sp.] diamond 303 47.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
27821136 27821136 PRJNA770826_P_NODE_204_length_1528_cov_3.364435_g162_i0 PRJNA770826 204 1528 3.364435 51.4085668 Pseudomonadati 3379134 Bacteria Bacteria 140 1.3199999999999999e-31   NR MDA3896178.1 2049433 g162 i0 45 0.673429319371728 189 91 36.9 5 1191 628 409 585 MDA3896178.1 S8 family serine peptidase [Desulfobacteraceae bacterium] diamond 1029 140 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28768104 28768104 PRJNA770826_P_NODE_34127_length_165_cov_0.896552_g33956_i0 PRJNA770826 34127 165 0.896552 1.4793108 root 1 Root_unresolved Root_unresolved 59.3 1.69e-8   NR OPY09332.1 1811716 g33956 i0 63.2 9.58181818181818 38 14 69.1 0 49 162 4 41 OPY09332.1 MAG: Chaperone protein DnaJ [Syntrophaceae bacterium PtaB.Bin038] diamond 1581 59.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium PtaB.Bin038
28884820 28884820 PRJNA770826_P_NODE_12708_length_226_cov_0.881356_g12537_i0 PRJNA770826 12708 226 0.881356 1.99186456 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 72.8 7.65e-13   NR MEW5734281.1 2202153 g12537 i0 70 0.663716814159292 50 15 66.4 0 151 2 330 379 MEW5734281.1 MBL fold metallo-hydrolase [Thermodesulfobacteriota bacterium] diamond 150 72.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
28916247 28916247 PRJNA770826_P_NODE_25168_length_169_cov_0.866667_g24997_i0 PRJNA770826 25168 169 0.866667 1.46466723 Desulfobacterales bacterium 2044940 Bacteria Bacteria 47 4.22e-4   NR MCP3955696.1 2044940 g24997 i0 45 0.710059171597633 40 22 71 0 122 3 299 338 MCP3955696.1 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase [Desulfobacterales bacterium] diamond 120 47 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
29210373 29210373 PRJNA770826_P_NODE_6229_length_335_cov_1.090909_g6058_i0 PRJNA770826 6229 335 1.090909 3.65454515 Pseudomonadati 3379134 Bacteria Bacteria 181 1.5899999999999996e-55   NR WP_092372219.1 52560 g6058 i0 79.3 13.9164179104478 111 23 99.4 0 335 3 69 179 WP_092372219.1 NAD(P)H:quinone oxidoreductase [Desulfomicrobium apsheronum] diamond 4662 181 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfomicrobiaceae Desulfomicrobium Desulfomicrobium apsheronum
29232355 29232355 PRJNA770826_P_NODE_6809_length_318_cov_1.483271_g6638_i0 PRJNA770826 6809 318 1.483271 4.71680178 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 86.7 2.01e-17   NR MCD6584341.1 2049433 g6638 i0 54.4 1.45283018867925 79 35 73.6 1 295 62 130 208 MCD6584341.1 iron-containing alcohol dehydrogenase [Desulfobacteraceae bacterium] diamond 462 86.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
30116350 30116350 PRJNA770826_P_NODE_29972_length_167_cov_0.881356_g29801_i0 PRJNA770826 29972 167 0.881356 1.47186452 Desulfobacterales bacterium 2044940 Bacteria Bacteria 57.4 8.93e-8   NR MCU0598426.1 2044940 g29801 i0 43.1 1.16766467065868 65 26 97 1 1 162 60 124 MCU0598426.1 ankyrin repeat domain-containing protein [Desulfobacterales bacterium] diamond 195 57.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30211053 30211053 PRJNA770826_P_NODE_31952_length_166_cov_0.888889_g31781_i0 PRJNA770826 31952 166 0.888889 1.47555574 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 41.2 0.0452   NR MEA3224082.1 2202153 g31781 i0 45.5 0.795180722891566 44 23 77.7 1 131 3 8 51 MEA3224082.1 MFS transporter [Thermodesulfobacteriota bacterium] diamond 132 41.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30347725 30347725 PRJNA770826_P_NODE_31092_length_166_cov_0.888889_g30921_i0 PRJNA770826 31092 166 0.888889 1.47555574 Thermodesulfobacteriota 200940 Bacteria Bacteria 67.8 1.3e-11   NR HDL90589.1 39841 g30921 i0 54.4 2.00602409638554 57 24 99.4 1 165 1 16 72 HDL90589.1 J domain-containing protein [Thermodesulforhabdus norvegica] diamond 333 68.2 0.994134897360704 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Thermodesulforhabdaceae Thermodesulforhabdus Thermodesulforhabdus norvegica
30473738 30473738 PRJNA770826_P_NODE_9753_length_259_cov_0.980952_g9582_i0 PRJNA770826 9753 259 0.980952 2.54066568 Pseudomonadati 3379134 Bacteria Bacteria 74.7 1.18e-13   NR MEN8140424.1 2202153 g9582 i0 37.2 2.61776061776062 78 48 90.3 1 11 244 160 236 MEN8140424.1 patatin-like phospholipase family protein [Thermodesulfobacteriota bacterium] diamond 678 74.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31611544 31611544 PRJNA770826_P_NODE_22956_length_169_cov_0.866667_g22785_i0 PRJNA770826 22956 169 0.866667 1.46466723 root 1 Root_unresolved Root_unresolved 84 4.06e-17   NR WP_215734054.1 155042 g22785 i0 70.9 2.94674556213018 55 16 97.6 0 5 169 248 302 WP_215734054.1 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Geobacter grbiciae] diamond 498 84 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geobacter Geobacter grbiciae
31696756 31696756 PRJNA770826_P_NODE_20417_length_179_cov_1.246154_g20246_i0 PRJNA770826 20417 179 1.246154 2.2306156599999998 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 60.1 3.71e-9   NR MEW5736451.1 2202153 g20246 i0 54.2 0.988826815642458 59 24 95.5 2 178 8 78 135 MEW5736451.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 177 60.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31823118 31823118 PRJNA770826_P_NODE_13357_length_220_cov_1.216374_g13186_i0 PRJNA770826 13357 220 1.216374 2.6760228 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 60.8 3.69e-9   NR MDA8418796.1 2049433 g13186 i0 68.3 2.03181818181818 41 13 55.9 0 56 178 4 44 MDA8418796.1 DUF2589 domain-containing protein [Desulfobacteraceae bacterium] diamond 447 60.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
31990954 31990954 PRJNA770826_P_NODE_42838_length_162_cov_0.920354_g42667_i0 PRJNA770826 42838 162 0.920354 1.49097348 Pseudomonadati 3379134 Bacteria Bacteria 42.7 0.0099   NR WP_287038496.1 2289 g42667 i0 55.8 1.59259259259259 43 17 75.9 1 3 125 19 61 WP_287038496.1 MULTISPECIES: DUF2589 domain-containing protein [Desulfobacter] diamond 258 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter  
32212624 32212624 PRJNA770826_P_NODE_13018_length_223_cov_1.189655_g12847_i0 PRJNA770826 13018 223 1.189655 2.65293065 Desulfuromusa 37817 Bacteria Bacteria 55.8 6.7e-7   NR WP_092344672.1 37625 g12847 i0 41.7 6.12107623318386 60 35 80.7 0 206 27 339 398 WP_092344672.1 heavy metal translocating P-type ATPase [Desulfuromusa kysingii] diamond 1365 56.2 0.99288256227758 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae Desulfuromusa Desulfuromusa kysingii
32266476 32266476 PRJNA770826_P_NODE_14198_length_214_cov_1.163636_g14027_i0 PRJNA770826 14198 214 1.163636 2.49018104 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 76.3 3.97e-14   NR HAO22905.1 2049433 g14027 i0 44.7 1.19158878504673 85 33 99.5 2 213 1 231 315 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 255 76.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32487880 32487880 PRJNA770826_P_NODE_23119_length_169_cov_0.866667_g22948_i0 PRJNA770826 23119 169 0.866667 1.46466723 Desulfuromonadales bacterium GWC2_61_2 2099678 Bacteria Bacteria 53.9 1.55e-6   NR OGR31727.1 1797916 g22948 i0 47.5 5.23668639053254 59 26 95.9 1 8 169 171 229 OGR31727.1 MAG: hypothetical protein A2005_03300 [Desulfuromonadales bacterium GWC2_61_20] diamond 885 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales     Desulfuromonadales bacterium GWC2_61_20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;