RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770826" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28695658 28695658 PRJNA770826_P_NODE_38887_length_163_cov_1.368421_g38716_i0 PRJNA770826 38887 163 1.368421 2.23052623 Synergistaceae bacterium 2053624 Bacteria Bacteria 73.6 3.97e-14   NR HOO64696.1 2053624 g38716 i0 62.3 0.975460122699387 53 20 97.5 0 3 161 86 138 HOO64696.1 TIGR00266 family protein [Synergistaceae bacterium] diamond 159 73.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30306511 30306511 PRJNA770826_P_NODE_19412_length_184_cov_1.155556_g19241_i0 PRJNA770826 19412 184 1.155556 2.12622304 Synergistaceae bacterium 2053624 Bacteria Bacteria 81.6 1.39e-17   NR MBQ7665751.1 2053624 g19241 i0 61 2.90217391304348 59 23 96.2 0 6 182 48 106 MBQ7665751.1 hypoxanthine phosphoribosyltransferase [Synergistaceae bacterium] diamond 534 81.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;