RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA770826", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27211107 27211107 PRJNA770826_P_NODE_27682_length_168_cov_0.873950_g27511_i0 PRJNA770826 27682 168 0.87395 1.468236 Nitrososphaerota archaeon 2026795 Archaea Archaea 44.3 0.00271   NR MDE1862708.1 2026795 g27511 i0 42 1.85714285714286 50 29 89.3 0 166 17 94 143 MDE1862708.1 DUF2589 domain-containing protein [Nitrososphaerota archaeon] diamond 312 44.3 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28474514 28474514 PRJNA770826_P_NODE_43366_length_162_cov_0.920354_g43195_i0 PRJNA770826 43366 162 0.920354 1.49097348 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 42 0.0243   NR HSF28567.1 2202732 g43195 i0 34 0.925925925925926 50 33 92.6 0 10 159 619 668 HSF28567.1 M1 family metallopeptidase [Nitrosopumilaceae archaeon] diamond 150 42 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
30306516 30306516 PRJNA770826_P_NODE_28372_length_167_cov_0.881356_g28201_i0 PRJNA770826 28372 167 0.881356 1.47186452 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 74.7 3.51e-14   NR HEX7142370.1 2169593 g28201 i0 66.7 3.88023952095808 54 18 97 0 5 166 105 158 HEX7142370.1 SDR family oxidoreductase [Nitrososphaeraceae archaeon] diamond 648 74.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;