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contig_metadata

17 rows where bioproject = "PRJNA770826" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770826 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5850342 5850342 PRJNA770826_P_NODE_11445_length_238_cov_1.650794_g11274_i0 PRJNA770826 11445 238 1.650794 3.92888972 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 78.6 7.83e-15   NR MEO7502219.1 2026741 g11274 i0 60 3.64285714285714 75 26 89.5 1 236 24 319 393 MEO7502219.1 S8 family serine peptidase [Gemmatimonadaceae bacterium] diamond 867 78.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
5850363 5850363 PRJNA770826_P_NODE_14565_length_211_cov_1.604938_g14394_i0 PRJNA770826 14565 211 1.604938 3.38641918 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 92.8 5.22e-20   NR MEJ7809183.1 2026741 g14394 i0 69.4 13.2227488151659 62 19 88.2 0 210 25 345 406 MEJ7809183.1 acyl-CoA carboxylase subunit beta [Gemmatimonadaceae bacterium] diamond 2790 92.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
8400075 8400075 PRJNA770826_P_NODE_19067_length_185_cov_1.845588_g18896_i0 PRJNA770826 19067 185 1.845588 3.4143378 Pseudomonadati 3379134 Bacteria Bacteria 73.6 2.13e-13   NR HIF20432.1 2026742 g18896 i0 67.2 2.96756756756757 61 17 98.9 2 184 2 309 366 HIF20432.1 epoxide hydrolase [Gemmatimonadota bacterium] diamond 549 73.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
9675354 9675354 PRJNA770826_P_NODE_34288_length_165_cov_0.896552_g34117_i0 PRJNA770826 34288 165 0.896552 1.4793108 Longimicrobiales bacterium 2910168 Bacteria Bacteria 87.9 3.78e-13   NTclustered gi|2518596698|emb|OX639991.1| 2910168 g34117 i0 82.692 0.866666666666667 104 13 61 4 57 156 870169 870271 MAG: Longimicrobiales bacterium isolate affa3490-31b4-448a-b7fc-cc7950b7f85b genome assembly, chromosome: 1 blastn 143 87.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
13500733 13500733 PRJNA770826_P_NODE_7111_length_310_cov_1.590038_g6940_i0 PRJNA770826 7111 310 1.590038 4.9291178 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 451 2.44e-122   NTclustered gi|2874253789|emb|OY969773.1| 412054 g6940 i0 92.926 186.841935483871 311 21 100 1 1 310 421302 421612 MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 blastn 57921 451 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
28642038 28642038 PRJNA770826_P_NODE_43567_length_162_cov_0.920354_g43396_i0 PRJNA770826 43567 162 0.920354 1.49097348 Bacteria 2 Bacteria Bacteria 43.5 0.00651   NR MBW3552209.1 2026742 g43396 i0 34.1 2.27777777777778 41 27 75.9 0 145 23 177 217 MBW3552209.1 LLM class flavin-dependent oxidoreductase [Gemmatimonadota bacterium] diamond 369 43.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28758572 28758572 PRJNA770826_P_NODE_37767_length_164_cov_0.904348_g37596_i0 PRJNA770826 37767 164 0.904348 1.48313072 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 48.1 1.31e-4   NR MCH7475715.1 2026742 g37596 i0 52 0.914634146341463 50 22 89.6 2 156 10 123 171 MCH7475715.1 CAP domain-containing protein [Gemmatimonadota bacterium] diamond 150 48.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29484550 29484550 PRJNA770826_P_NODE_6850_length_317_cov_1.361940_g6679_i0 PRJNA770826 6850 317 1.36194 4.3173498 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 117 3.28e-28   NR MEN8145548.1 2026742 g6679 i0 56 2.90536277602524 100 44 94.6 0 307 8 440 539 MEN8145548.1 NAD-dependent malic enzyme [Gemmatimonadota bacterium] diamond 921 117 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30495754 30495754 PRJNA770826_P_NODE_38873_length_163_cov_1.368421_g38702_i0 PRJNA770826 38873 163 1.368421 2.23052623 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 41.6 0.0195   NR TVR53363.1 2448054 g38702 i0 46.5 0.791411042944785 43 22 77.3 1 22 147 2 44 TVR53363.1 MAG: hypothetical protein EA421_11390 [Gemmatimonadales bacterium] diamond 129 41.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30874738 30874738 PRJNA770826_P_NODE_35654_length_165_cov_0.896552_g35483_i0 PRJNA770826 35654 165 0.896552 1.4793108 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 92.4 4.17e-20   NR MDE2804053.1 2026742 g35483 i0 72.7 4 55 13 100 1 165 1 106 158 MDE2804053.1 aldehyde dehydrogenase family protein [Gemmatimonadota bacterium] diamond 660 92.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31127100 31127100 PRJNA770826_P_NODE_13875_length_216_cov_1.544910_g13704_i0 PRJNA770826 13875 216 1.54491 3.3370056 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 72 1.19e-12   NR HEX6631285.1 2026741 g13704 i0 51.3 1.93055555555556 76 33 100 2 1 216 223 298 HEX6631285.1 carboxypeptidase regulatory-like domain-containing protein [Gemmatimonadaceae bacterium] diamond 417 72 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31728314 31728314 PRJNA770826_P_NODE_43057_length_162_cov_0.920354_g42886_i0 PRJNA770826 43057 162 0.920354 1.49097348 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 45.1 0.00131   NR HUF27274.1 2026741 g42886 i0 55.3 1.53703703703704 38 17 70.4 0 144 31 25 62 HUF27274.1 CAP domain-containing protein [Gemmatimonadaceae bacterium] diamond 249 45.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31759981 31759981 PRJNA770826_P_NODE_25357_length_168_cov_1.310924_g25186_i0 PRJNA770826 25357 168 1.310924 2.20235232 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 60.5 5.01e-9   NR MEX2473071.1 2026742 g25186 i0 56.6 6.625 53 23 94.6 0 167 9 137 189 MEX2473071.1 slipin family protein [Gemmatimonadota bacterium] diamond 1113 60.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31801042 31801042 PRJNA770826_P_NODE_32317_length_166_cov_0.888889_g32146_i0 PRJNA770826 32317 166 0.888889 1.47555574 Pseudomonadati 3379134 Bacteria Bacteria 50.1 3.32e-5   NR MBT4500739.1 2026742 g32146 i0 45.3 1.8433734939759 53 28 94 1 6 161 254 306 MBT4500739.1 choice-of-anchor D domain-containing protein [Gemmatimonadota bacterium] diamond 306 50.4 0.994047619047619 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32076422 32076422 PRJNA770826_P_NODE_27838_length_168_cov_0.873950_g27667_i0 PRJNA770826 27838 168 0.87395 1.468236 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 48.1 1.3e-4   NR MBP6442554.1 2448054 g27667 i0 45.9 1.48214285714286 37 20 66.1 0 55 165 91 127 MBP6442554.1 carboxymuconolactone decarboxylase family protein [Gemmatimonadales bacterium] diamond 249 48.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32139758 32139758 PRJNA770826_P_NODE_19978_length_181_cov_1.378788_g19807_i0 PRJNA770826 19978 181 1.378788 2.49560628 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 79.3 2.07e-15   NR NNE08319.1 2026742 g19807 i0 59 1.01104972375691 61 24 99.4 1 2 181 215 275 NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] diamond 183 79.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32551294 32551294 PRJNA770826_P_NODE_12279_length_229_cov_1.733333_g12108_i0 PRJNA770826 12279 229 1.733333 3.96933257 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 110 1.1300000000000002e-27   NR MBB29019.1 2026742 g12108 i0 71.1 2.98689956331878 76 22 99.6 0 228 1 169 244 MBB29019.1 glucosamine-6-phosphate deaminase [Gemmatimonadota bacterium] diamond 684 110 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;