contig_metadata
12 rows where bioproject = "PRJNA770826" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 746931 | 746931 | PRJNA770826_P_NODE_4121_length_425_cov_1.510638_g3950_i0 | PRJNA770826 | 4121 | 425 | 1.510638 | 6.4202115 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 208 | 3.7900000000000005e-64 | NR | NGX47840.1 | 2081524 | g3950 | i0 | 65.7 | 18.0282352941176 | 140 | 47 | 98.8 | 1 | 425 | 6 | 150 | 288 | NGX47840.1 GDP-L-fucose synthase [Chlamydiota bacterium] | diamond | 7662 | 208 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 3298180 | 3298180 | PRJNA770826_P_NODE_7983_length_289_cov_0.908333_g7812_i0 | PRJNA770826 | 7983 | 289 | 0.908333 | 2.62508237 | Candidatus Syngnamydia salmonis | 504270 | Bacteria | Bacteria | 342 | 1.4199999999999997e-89 | NTclustered | gi|1214145827|gb|KY427067.1| | 504270 | g7812 | i0 | 92.857 | 251.429065743945 | 238 | 13 | 82 | 4 | 1 | 236 | 3721 | 3486 | Candidatus Syngnamydia salmonis isolate H03/14Pp 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer 23S ribosomal RNA and 5S ribosomal RNA genes, complete sequence | blastn | 72663 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Syngnamydia | Candidatus Syngnamydia salmonis | |
| 4575177 | 4575177 | PRJNA770826_P_NODE_2784_length_521_cov_1.932203_g2615_i0 | PRJNA770826 | 2784 | 521 | 1.932203 | 10.06677763 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|18029193|gb|AF364564.1| | 174324 | g2615 | i0 | 94.348 | 106.781190019194 | 460 | 26 | 88 | 0 | 62 | 521 | 173 | 632 | Uncultured Chlamydiales bacterium clone P-4 16S ribosomal RNA gene, partial sequence | blastn | 55633 | 706 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 16049589 | 16049589 | PRJNA770826_P_NODE_7353_length_304_cov_1.560784_g7182_i0 | PRJNA770826 | 7353 | 304 | 1.560784 | 4.74478336 | Simkaniaceae bacterium | 2698248 | Bacteria | Bacteria | 337 | 6.98e-88 | NTclustered | gi|2041291174|gb|CP073762.1| | 2698248 | g7182 | i0 | 87.713 | 149.220394736842 | 293 | 30 | 96 | 6 | 14 | 304 | 517318 | 517606 | MAG: Simkaniaceae bacterium isolate M30B2 chromosome, complete genome | blastn | 45363 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkaniaceae bacterium | ||
| 16509638 | 16509638 | PRJNA770826_P_NODE_41533_length_162_cov_1.380531_g41362_i0 | PRJNA770826 | 41533 | 162 | 1.380531 | 2.23646022 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 267 | 4.419999999999999e-67 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g41362 | i0 | 96.296 | 155.37037037037 | 162 | 6 | 100 | 0 | 1 | 162 | 1248920 | 1248759 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 25170 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 20333158 | 20333158 | PRJNA770826_P_NODE_7336_length_304_cov_2.141176_g7165_i0 | PRJNA770826 | 7336 | 304 | 2.141176 | 6.50917504 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 518 | 2.32e-142 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g7165 | i0 | 97.987 | 162.582236842105 | 298 | 6 | 98 | 0 | 7 | 304 | 1249349 | 1249052 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 49425 | 518 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 24158344 | 24158344 | PRJNA770826_P_NODE_12739_length_225_cov_1.869318_g12568_i0 | PRJNA770826 | 12739 | 225 | 1.869318 | 4.2059655 | Parachlamydia | 83551 | Bacteria | Bacteria | 355 | 1.36e-93 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g12568 | i0 | 95.133 | 149.56 | 226 | 9 | 100 | 2 | 1 | 225 | 953 | 1177 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 33651 | 355 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 24973586 | 24973586 | PRJNA770826_P_NODE_5520_length_360_cov_1.633441_g5349_i0 | PRJNA770826 | 5520 | 360 | 1.633441 | 5.8803876 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 455 | 2.23e-123 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g5349 | i0 | 89.694 | 167.45 | 359 | 33 | 99 | 3 | 2 | 358 | 654194 | 653838 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 60282 | 455 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 29999808 | 29999808 | PRJNA770826_P_NODE_22991_length_169_cov_0.866667_g22820_i0 | PRJNA770826 | 22991 | 169 | 0.866667 | 1.46466723 | Parachlamydiaceae | 92713 | Bacteria | Bacteria | 54.3 | 1.15e-6 | NR | WP_059060745.1 | 389348 | g22820 | i0 | 55.6 | 2.84023668639053 | 54 | 23 | 94.1 | 1 | 168 | 10 | 258 | 311 | WP_059060745.1 ADP-ribosylhydrolase MavL family protein [Candidatus Protochlamydia naegleriophila] | diamond | 480 | 54.7 | 0.992687385740402 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 31253894 | 31253894 | PRJNA770826_P_NODE_16435_length_200_cov_0.814570_g16264_i0 | PRJNA770826 | 16435 | 200 | 0.81457 | 1.62914 | Chlamydiales bacterium STE3 | 1910938 | Bacteria | Bacteria | 47 | 6.69e-4 | NR | KAF3363195.1 | 1910938 | g16264 | i0 | 44.4 | 0.945 | 63 | 30 | 93 | 2 | 3 | 188 | 308 | 366 | KAF3363195.1 Uncharacterized protein PHSC3_000209 [Chlamydiales bacterium STE3] | diamond | 189 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium STE3 | |||
| 32139744 | 32139744 | PRJNA770826_P_NODE_12198_length_230_cov_1.618785_g12027_i0 | PRJNA770826 | 12198 | 230 | 1.618785 | 3.7232055 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 69.7 | 1.55e-12 | NR | MDB2614325.1 | 2047757 | g12027 | i0 | 38.4 | 0.952173913043478 | 73 | 45 | 95.2 | 0 | 12 | 230 | 75 | 147 | MDB2614325.1 hypothetical protein [Chlamydiales bacterium] | diamond | 219 | 69.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 32361409 | 32361409 | PRJNA770826_P_NODE_28059_length_167_cov_1.322034_g27888_i0 | PRJNA770826 | 28059 | 167 | 1.322034 | 2.20779678 | Simkaniaceae bacterium | 2698248 | Bacteria | Bacteria | 79 | 2.27e-15 | NR | QVL54756.1 | 2698248 | g27888 | i0 | 64.6 | 2.74850299401198 | 48 | 17 | 86.2 | 0 | 3 | 146 | 466 | 513 | QVL54756.1 MAG: hypothetical protein KFB95_05390 [Simkaniaceae bacterium] | diamond | 459 | 79 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkaniaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;