RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA770826" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA770826 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27717067 27717067 PRJNA770826_P_NODE_13984_length_215_cov_1.879518_g13813_i0 PRJNA770826 13984 215 1.879518 4.0409637 Candidatus Peregrinibacteria bacterium CG_4_1 2030811 Bacteria Bacteria 92.8 6.09e-20   NR PIZ75682.1 1974774 g13813 i0 64.8 2.86046511627907 71 25 99.1 0 3 215 98 168 PIZ75682.1 MAG: carbamoyl phosphate synthase large subunit [Candidatus Peregrinibacteria bacterium CG_4_10_14_0_2_um_filter_38_24] diamond 615 92.8 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium CG_4_10_14_0_2_um_filter_38_24
27811629 27811629 PRJNA770826_P_NODE_8484_length_279_cov_1.347826_g8313_i0 PRJNA770826 8484 279 1.347826 3.76043454 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 172 1.05e-49   NR MBI5754803.1 2030811 g8313 i0 88 0.989247311827957 92 11 98.9 0 278 3 318 409 MBI5754803.1 argininosuccinate synthase [Candidatus Peregrinibacteria bacterium] diamond 276 172 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
29746705 29746705 PRJNA770826_P_NODE_34610_length_165_cov_0.896552_g34439_i0 PRJNA770826 34610 165 0.896552 1.4793108 Bacteria 2 Bacteria Bacteria 48.5 9.02e-5   NR OGJ57591.1 1801916 g34439 i0 49.1 1.98181818181818 53 18 96.4 2 3 161 77 120 OGJ57591.1 MAG: hypothetical protein A2789_00755 [Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_54_22] diamond 327 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_54_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;