RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA770826" and tax_phylum = "Balneolota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27852450 27852450 PRJNA770826_P_NODE_40304_length_163_cov_0.912281_g40133_i0 PRJNA770826 40304 163 0.912281 1.48701803 Pseudomonadati 3379134 Bacteria Bacteria 90.9 1.26e-19   NR WP_018128233.1 287535 g40133 i0 75.9 40.1963190184049 54 13 99.4 0 162 1 262 315 WP_018128233.1 aldehyde dehydrogenase family protein [Balneola vulgaris] diamond 6552 91.3 0.995618838992333 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola vulgaris
28284767 28284767 PRJNA770826_P_NODE_30626_length_167_cov_0.881356_g30455_i0 PRJNA770826 30626 167 0.881356 1.47186452 Rhodohalobacter sp. 1974210 Bacteria Bacteria 59.3 1.88e-8   NR WP_322573191.1 1974210 g30455 i0 52.8 1.90419161676647 53 23 95.2 1 165 7 393 443 WP_322573191.1 S9 family peptidase [Rhodohalobacter sp.] diamond 318 59.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Rhodohalobacter Rhodohalobacter sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;