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contig_metadata

10 rows where bioproject = "PRJNA770826" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 10 ✖

bioproject 1

  • PRJNA770826 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23699939 23699939 PRJNA770826_P_NODE_5519_length_360_cov_1.672026_g5348_i0 PRJNA770826 5519 360 1.672026 6.0192936 Methanosarcinales archaeon 2250255 Archaea Archaea 191 6.61e-57   NR RYE83110.1 2250255 g5348 i0 79.7 0.983333333333333 118 24 98.3 0 5 358 97 214 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 354 191 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27663239 27663239 PRJNA770826_P_NODE_4744_length_394_cov_1.205797_g4573_i0 PRJNA770826 4744 394 1.205797 4.75084018 root 1 Root_unresolved Root_unresolved 80.9 8.47e-15   NR MBO7518105.1 66852 g4573 i0 63.8 1.78934010152284 58 19 42.6 2 333 166 414 471 MBO7518105.1 hypothetical protein [Methanobrevibacter sp.] diamond 705 81.3 0.995079950799508 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28821473 28821473 PRJNA770826_P_NODE_28768_length_167_cov_0.881356_g28597_i0 PRJNA770826 28768 167 0.881356 1.47186452 Methanomicrobiales archaeon 2184052 Archaea Archaea 67.4 2.67e-11   NR MEI7649455.1 2184052 g28597 i0 57.4 0.970059880239521 54 23 97 0 5 166 343 396 MEI7649455.1 TIGR03768 family metallophosphoesterase [Methanomicrobiales archaeon] diamond 162 67.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
29326854 29326854 PRJNA770826_P_NODE_43969_length_162_cov_0.858407_g43798_i0 PRJNA770826 43969 162 0.858407 1.39061934 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 41.6 0.0314   NR HSA35153.1 1906667 g43798 i0 74.1 0.5 27 7 50 0 68 148 295 321 HSA35153.1 AAA family ATPase [Methanomassiliicoccales archaeon] diamond 81 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
29390239 29390239 PRJNA770826_P_NODE_24269_length_169_cov_0.866667_g24098_i0 PRJNA770826 24269 169 0.866667 1.46466723 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 69.7 4.26e-12   NR MFL2974845.1 2670411 g24098 i0 56.6 8.16568047337278 53 23 94.1 0 159 1 628 680 MFL2974845.1 methionine--tRNA ligase [Candidatus Thalassarchaeaceae archaeon] diamond 1380 69.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
30685054 30685054 PRJNA770826_P_NODE_21753_length_173_cov_1.258065_g21582_i0 PRJNA770826 21753 173 1.258065 2.17645245 Methanosarcina barkeri 2208 Archaea Archaea 50.4 1.01e-5   NR WP_155396839.1 2208 g21582 i0 53.1 0.84971098265896 49 22 85 1 21 167 23 70 WP_155396839.1 hypothetical protein [Methanosarcina barkeri] diamond 147 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
30906548 30906548 PRJNA770826_P_NODE_25514_length_168_cov_0.873950_g25343_i0 PRJNA770826 25514 168 0.87395 1.468236 Methanothrix soehngenii 2223 Archaea Archaea 57 1.23e-7   NR HNY34772.1 2223 g25343 i0 63 0.821428571428571 46 16 82.1 1 2 139 211 255 HNY34772.1 hypothetical protein [Methanothrix soehngenii] diamond 138 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
31042669 31042669 PRJNA770826_P_NODE_20935_length_177_cov_1.218750_g20764_i0 PRJNA770826 20935 177 1.21875 2.1571875 Methanococcoides 2225 Archaea Archaea 85.1 1.34e-17   NR WP_048204366.1 2226 g20764 i0 78.4 2.59322033898305 51 11 86.4 0 21 173 186 236 WP_048204366.1 serine hydroxymethyltransferase [Methanococcoides methylutens] diamond 459 85.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides Methanococcoides methylutens
31412141 31412141 PRJNA770826_P_NODE_16836_length_197_cov_1.405405_g16665_i0 PRJNA770826 16836 197 1.405405 2.76864785 unclassified Archaeoglobus 2643606 Archaea Archaea 62.4 1.61e-9   NR WP_290596002.1 2643606 g16665 i0 43.8 0.974619289340102 64 34 97.5 1 197 6 167 228 WP_290596002.1 MULTISPECIES: alpha/beta hydrolase [unclassified Archaeoglobus] diamond 192 62.4 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus  
32244512 32244512 PRJNA770826_P_NODE_2238_length_581_cov_2.770677_g2074_i0 PRJNA770826 2238 581 2.770677 16.09763337 Geoglobus 190818 Archaea Archaea 187 5.519999999999998e-55   NR WP_048095167.1 113653 g2074 i0 48.7 1.99311531841652 193 96 99.7 2 579 1 46 235 WP_048095167.1 bis-aminopropyl spermidine synthase family protein [Geoglobus ahangari] diamond 1158 187 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Geoglobus Geoglobus ahangari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;