contig_metadata
4 rows where bioproject = "PRJNA770826", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26714315 | 26714315 | PRJNA770826_P_NODE_10341_length_251_cov_0.955446_g10170_i0 | PRJNA770826 | 10341 | 251 | 0.955446 | 2.39816946 | PVC group | 1783257 | Bacteria | Bacteria | 50.4 | 7.65e-5 | NR | WP_083800033.1 | 256847 | g10170 | i0 | 46.9 | 4.01593625498008 | 49 | 26 | 58.6 | 0 | 240 | 94 | 98 | 146 | WP_083800033.1 tetratricopeptide repeat protein [Lentisphaera araneosa] | diamond | 1008 | 50.8 | 0.992125984251969 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaera | Lentisphaera araneosa | |
| 27969242 | 27969242 | PRJNA770826_P_NODE_39725_length_163_cov_0.912281_g39554_i0 | PRJNA770826 | 39725 | 163 | 0.912281 | 1.48701803 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 47 | 3.49e-4 | NR | MBR2438817.1 | 2053569 | g39554 | i0 | 47.1 | 2.83435582822086 | 51 | 27 | 93.9 | 0 | 4 | 156 | 56 | 106 | MBR2438817.1 50S ribosomal protein L1 [Lentisphaeria bacterium] | diamond | 462 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 28894360 | 28894360 | PRJNA770826_P_NODE_37828_length_164_cov_0.904348_g37657_i0 | PRJNA770826 | 37828 | 164 | 0.904348 | 1.48313072 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 42 | 0.0243 | NR | NLB60368.1 | 1932692 | g37657 | i0 | 44.9 | 1.79268292682927 | 49 | 25 | 89.6 | 1 | 153 | 7 | 475 | 521 | NLB60368.1 hypothetical protein [Lentisphaerota bacterium] | diamond | 294 | 42.4 | 0.990566037735849 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 32708444 | 32708444 | PRJNA770826_P_NODE_18100_length_190_cov_1.475177_g17929_i0 | PRJNA770826 | 18100 | 190 | 1.475177 | 2.8028363 | Lentisphaerae bacterium RIFOXYA12_64_32 | 1798577 | Bacteria | Bacteria | 43.9 | 0.0075 | NR | OGV71724.1 | 1798577 | g17929 | i0 | 68 | 0.789473684210526 | 25 | 8 | 39.5 | 0 | 113 | 187 | 1622 | 1646 | OGV71724.1 MAG: hypothetical protein A3K18_01925 [Lentisphaerae bacterium RIFOXYA12_64_32] | diamond | 150 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium RIFOXYA12_64_32 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;