RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA770826", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 15 ✖

tax_clade 1

  • Metamonada · 15 ✖

bioproject 1

  • PRJNA770826 · 15 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9675353 9675353 PRJNA770826_P_NODE_34208_length_165_cov_0.896552_g34037_i0 PRJNA770826 34208 165 0.896552 1.4793108 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 2.2e-20   NR TNJ29519.1 5742 g34037 i0 77.2 11.0909090909091 57 10 98.2 1 163 2 143 199 TNJ29519.1 Kinase, CMGC MAPK [Giardia muris] diamond 1830 92.8 0.991379310344828 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
20333121 20333121 PRJNA770826_P_NODE_14916_length_209_cov_1.300000_g14745_i0 PRJNA770826 14916 209 1.3 2.717 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 96.3 6.779999999999998e-24   NR GKT24809.1 2918883 g14745 i0 72.6 1.76555023923445 62 17 89 0 209 24 48 109 GKT24809.1 Histone H4 like protein [Aduncisulcus paluster] diamond 369 96.3 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
26641692 26641692 PRJNA770826_P_NODE_18021_length_191_cov_1.098592_g17850_i0 PRJNA770826 18021 191 1.098592 2.09831072 Kipferlia bialata 797122 Fornicata other_Eukaryota 62.8 1.59e-9   NR GIQ84406.1 797122 g17850 i0 50.8 1.97905759162304 63 30 99 1 2 190 466 527 GIQ84406.1 poxvirus/kinetoplastid-type cap-specific nucleoside 2-O-methyltransferase, partial [Kipferlia bialata] diamond 378 62.8 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
26704877 26704877 PRJNA770826_P_NODE_18801_length_187_cov_1.130435_g18630_i0 PRJNA770826 18801 187 1.130435 2.11391345 Giardia intestinalis 5741 Fornicata other_Eukaryota 52 9.78e-6   NR ESU40463.1 5741 g18630 i0 47.5 0.978609625668449 61 27 89.8 3 172 5 326 386 ESU40463.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 183 52 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
26904735 26904735 PRJNA770826_P_NODE_801_length_927_cov_1.487472_g691_i0 PRJNA770826 801 927 1.487472 13.78886544 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 204 2.8300000000000007e-59   NR CAK8746233.1 28002 g691 i0 50.5 1.22653721682848 198 90 64.1 2 123 716 49 238 CAK8746233.1 HINF_020048 [Hexamita inflata] diamond 1137 204 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
27473677 27473677 PRJNA770826_P_NODE_11883_length_234_cov_1.086486_g11712_i0 PRJNA770826 11883 234 1.086486 2.54237724 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.4 2.24e-7   NR KWX15913.1 1394984 g11712 i0 39.8 1.82051282051282 83 35 88.5 4 217 11 254 335 KWX15913.1 Calcium-transporting ATPase [Giardia intestinalis assemblage B] diamond 426 57.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
28063920 28063920 PRJNA770826_P_NODE_10445_length_249_cov_1.560000_g10274_i0 PRJNA770826 10445 249 1.56 3.8844 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 125 2.4199999999999997e-31   NR KAG9393927.1 201153 g10274 i0 77.8 2.92771084337349 81 18 97.6 0 1 243 325 405 KAG9393927.1 plasma membrane calcium ATPase [Carpediemonas membranifera] diamond 729 125 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
28632565 28632565 PRJNA770826_P_NODE_7667_length_296_cov_1.263158_g7496_i0 PRJNA770826 7667 296 1.263158 3.73894768 Hexamita inflata 28002 Fornicata other_Eukaryota 48.1 9.25e-4   NR CAK8791465.1 28002 g7496 i0 38.2 0.77027027027027 76 34 73 4 37 252 1655 1721 CAK8791465.1 HINF_084023 [Hexamita inflata] diamond 228 48.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
28853126 28853126 PRJNA770826_P_NODE_27268_length_168_cov_0.873950_g27097_i0 PRJNA770826 27268 168 0.87395 1.468236 Giardia muris 5742 Fornicata other_Eukaryota 44.7 0.0028   NR TNJ30320.1 5742 g27097 i0 40.7 0.964285714285714 54 29 96.4 1 167 6 40 90 TNJ30320.1 VSP protein [Giardia muris] diamond 162 44.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
29768896 29768896 PRJNA770826_P_NODE_39811_length_163_cov_0.912281_g39640_i0 PRJNA770826 39811 163 0.912281 1.48701803 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 45.8 0.00103   NR KAG9390023.1 201153 g39640 i0 43.4 0.975460122699387 53 28 97.5 1 162 4 147 197 KAG9390023.1 Leucine Rich Repeat [Carpediemonas membranifera] diamond 159 45.8 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30432783 30432783 PRJNA770826_P_NODE_22253_length_171_cov_1.278689_g22082_i0 PRJNA770826 22253 171 1.278689 2.18655819 Kipferlia bialata 797122 Fornicata other_Eukaryota 53.5 1.61e-6   NR GIQ89381.1 797122 g22082 i0 50 0.947368421052632 54 26 94.7 1 3 164 14 66 GIQ89381.1 40S ribosomal protein S1/3, eukaryotes [Kipferlia bialata] diamond 162 53.5 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
31737801 31737801 PRJNA770826_P_NODE_11557_length_237_cov_1.377660_g11386_i0 PRJNA770826 11557 237 1.37766 3.2650542 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 137 5.2000000000000004e-37   NR CAK8823628.1 28002 g11386 i0 80.8 19.746835443038 78 15 98.7 0 236 3 178 255 CAK8823628.1 HINF_021087 [Hexamita inflata] diamond 4680 137 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
32298271 32298271 PRJNA770826_P_NODE_9719_length_259_cov_1.438095_g9548_i0 PRJNA770826 9719 259 1.438095 3.72466605 Hexamita inflata 28002 Fornicata other_Eukaryota 53.5 1.95e-7   NR CAK8756973.1 28002 g9548 i0 50 1.52895752895753 44 20 51 1 7 138 1 42 CAK8756973.1 HINF_007622 [Hexamita inflata] diamond 396 53.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
32614063 32614063 PRJNA770826_P_NODE_15520_length_205_cov_1.333333_g15349_i0 PRJNA770826 15520 205 1.333333 2.73333265 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 43.9 0.00909   NR KAG9396300.1 201153 g15349 i0 42.6 0.790243902439024 54 29 76.1 1 31 186 560 613 KAG9396300.1 Piwi domain [Carpediemonas membranifera] diamond 162 43.9 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32834408 32834408 PRJNA770826_P_NODE_5480_length_361_cov_18.631410_g5309_i0 PRJNA770826 5480 361 18.63141 67.2593901 Giardia intestinalis assemblage B 1394984 Fornicata other_Eukaryota 47.8 0.00251   NR KWX13038.1 1394984 g5309 i0 37 0.606648199445983 73 42 57.3 2 253 47 103 175 KWX13038.1 Variant-specific surface protein [Giardia intestinalis assemblage B] diamond 219 47.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;