RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA770826", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA770826 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28168336 28168336 PRJNA770826_P_NODE_40285_length_163_cov_0.912281_g40114_i0 PRJNA770826 40285 163 0.912281 1.48701803 Chlorobaculum 256319 Bacteria Bacteria 68.2 5.87e-12   NR NTW53919.1 2053530 g40114 i0 51 6.75460122699386 49 24 90.2 0 148 2 158 206 NTW53919.1 CAP domain-containing protein [Chlorobaculum sp.] diamond 1101 68.6 0.994169096209913 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobaculum Chlorobaculum sp.
29137771 29137771 PRJNA770826_P_NODE_25869_length_168_cov_0.873950_g25698_i0 PRJNA770826 25869 168 0.87395 1.468236 Chlorobiales bacterium 2723030 Bacteria Bacteria 89 5.83e-19   NR MBC8042893.1 2723030 g25698 i0 69.6 1 56 17 100 0 1 168 304 359 MBC8042893.1 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase [Chlorobiales bacterium] diamond 168 89 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales     Chlorobiales bacterium
31222087 31222087 PRJNA770826_P_NODE_15335_length_206_cov_1.324841_g15164_i0 PRJNA770826 15335 206 1.324841 2.72917246 Chlorobiota bacterium 2268192 Bacteria Bacteria 62.4 2.62e-9   NR NPA35642.1 2268192 g15164 i0 58.3 4.87864077669903 48 20 69.9 0 61 204 333 380 NPA35642.1 citrate (Si)-synthase [Chlorobiota bacterium] diamond 1005 62.4 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;