RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA770826", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA770826 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9675389 9675389 PRJNA770826_P_NODE_4468_length_408_cov_1.103064_g4297_i0 PRJNA770826 4468 408 1.103064 4.50050112 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 52.8 0.039   NTclustered gi|2621703325|emb|OY762463.1| 3060593 g4297 i0 100 0.0686274509803922 28 0 7 0 133 160 1590911 1590938 MAG: Candidatus Cloacimonadales bacterium isolate 65c66405-a38e-4cb1-a3a4-7640fae4a1c6 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
21149469 21149469 PRJNA770826_P_NODE_22477_length_170_cov_1.289256_g22306_i0 PRJNA770826 22477 170 1.289256 2.1917352 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 69.7 4.24e-12   NR MDD3050852.1 2030808 g22306 i0 63.6 21.2647058823529 55 19 97.1 1 2 166 233 286 MDD3050852.1 chaperonin GroEL [Candidatus Cloacimonadota bacterium] diamond 3615 69.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32487890 32487890 PRJNA770826_P_NODE_40779_length_163_cov_0.912281_g40608_i0 PRJNA770826 40779 163 0.912281 1.48701803 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 50.4 2.3e-5   NR PID26513.1 2030808 g40608 i0 49.1 2.92638036809816 53 16 97.5 1 3 161 334 375 PID26513.1 MAG: elongation factor Tu [Candidatus Cloacimonadota bacterium] diamond 477 50.4 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;