RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770826", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28569112 28569112 PRJNA770826_P_NODE_8027_length_288_cov_0.870293_g7856_i0 PRJNA770826 8027 288 0.870293 2.50644384 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 54.3 2.04e-6   NR PYN74307.1 2053607 g7856 i0 37.8 0.9375 90 51 92.7 2 9 275 80 165 PYN74307.1 MAG: ATP synthase F1 subunit delta [Candidatus Rokuibacteriota bacterium] diamond 270 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32456279 32456279 PRJNA770826_P_NODE_22039_length_172_cov_1.268293_g21868_i0 PRJNA770826 22039 172 1.268293 2.18146396 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 72.4 4.77e-13   NR PYM63467.1 2053607 g21868 i0 64.3 1.88372093023256 56 20 97.7 0 170 3 149 204 PYM63467.1 MAG: hypothetical protein DME11_16895, partial [Candidatus Rokuibacteriota bacterium] diamond 324 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;