RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770826", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27495738 27495738 PRJNA770826_P_NODE_41903_length_162_cov_0.920354_g41732_i0 PRJNA770826 41903 162 0.920354 1.49097348 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 46.6 1.31e-4   NR HXG47957.1 2072417 g41732 i0 51.9 2.75925925925926 52 25 96.3 0 157 2 4 55 HXG47957.1 class I SAM-dependent methyltransferase [Candidatus Methylomirabilota bacterium] diamond 447 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32582747 32582747 PRJNA770826_P_NODE_30839_length_166_cov_1.512821_g30668_i0 PRJNA770826 30839 166 1.512821 2.51128286 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 97.8 4.16e-22   NR HXG48548.1 2072417 g30668 i0 75.9 1.95180722891566 54 13 97.6 0 164 3 86 139 HXG48548.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 324 97.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;