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contig_metadata

22 rows where bioproject = "PRJNA770826", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 22 ✖

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJNA770826 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3298099 3298099 PRJNA770826_P_NODE_2503_length_549_cov_4.370000_g2336_i0 PRJNA770826 2503 549 4.37 23.9913 Amoeba proteus 5775 Tubulinea other_Eukaryota 288 3.64e-97   NR AAW58116.1 5775 g2336 i0 80.2 0.885245901639344 162 32 88.5 0 64 549 1 162 AAW58116.1 peroxiredoxin, partial [Amoeba proteus] diamond 486 288 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
4575108 4575108 PRJNA770826_P_NODE_12264_length_229_cov_3.177778_g12093_i0 PRJNA770826 12264 229 3.177778 7.27711162 Hartmannella cantabrigiensis 239731 Tubulinea other_Eukaryota 285 1.85e-72   NTclustered gi|33946358|gb|AY294158.1| 239731 g12093 i0 89.083 88.9912663755458 229 25 100 0 1 229 254 26 Hartmannella cantabrigiensis actin mRNA, complete cds blastn 20379 285 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Hartmannella Hartmannella cantabrigiensis
4575234 4575234 PRJNA770826_P_NODE_504_length_1114_cov_28.676056_g425_i0 PRJNA770826 504 1114 28.676056 319.45126384 Copromyxa protea 931554 Tubulinea other_Eukaryota 809 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g425 i0 80.993 2.38330341113106 1047 176 93 18 84 1114 1382 343 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 2655 809 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
5850427 5850427 PRJNA770826_P_NODE_2585_length_540_cov_5.336049_g2417_i0 PRJNA770826 2585 540 5.336049 28.8146646 Pyxidicula operculata 1078852 Tubulinea other_Eukaryota 841 0   NTclustered gi|345452598|gb|JF694317.1| 1078852 g2417 i0 95.292 98.9888888888889 531 24 98 1 10 540 640 111 Pyxidicula operculata clone 2 actin gene, partial cds blastn 53454 841 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida   Pyxidicula Pyxidicula operculata
13500715 13500715 PRJNA770826_P_NODE_5131_length_375_cov_3.134969_g4960_i0 PRJNA770826 5131 375 3.134969 11.75613375 Pyxidicula operculata 1078852 Tubulinea other_Eukaryota 693 0   NTclustered gi|345294028|gb|JF694284.1| 1078852 g4960 i0 100 69.6293333333333 375 0 100 0 1 375 901 1275 Pyxidicula operculata small subunit ribosomal RNA gene, partial sequence blastn 26111 693 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida   Pyxidicula Pyxidicula operculata
16049573 16049573 PRJNA770826_P_NODE_513_length_1105_cov_29.258523_g425_i1 PRJNA770826 513 1105 29.258523 323.30667915 Copromyxa protea 931554 Tubulinea other_Eukaryota 837 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g425 i1 81.429 2.4316742081448 1050 172 94 18 72 1105 1385 343 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 2687 837 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
16049602 16049602 PRJNA770826_P_NODE_873_length_896_cov_30.332940_g425_i4 PRJNA770826 873 896 30.33294 271.7831424 Copromyxa protea 931554 Tubulinea other_Eukaryota 667 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g425 i4 80.562 2.63839285714286 890 154 98 17 21 896 1227 343 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 2364 667 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
17325288 17325288 PRJNA770826_P_NODE_574_length_1061_cov_28.289526_g425_i2 PRJNA770826 574 1061 28.289526 300.15187086 Copromyxa protea 931554 Tubulinea other_Eukaryota 832 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g425 i2 81.322 7.4062205466541 1044 178 97 15 4 1034 1040 1 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 7858 832 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
17325302 17325302 PRJNA770826_P_NODE_694_length_980_cov_2.987111_g589_i0 PRJNA770826 694 980 2.987111 29.2736878 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 441 1.8699999999999994e-153   NR AFX73090.1 160823 g589 i0 92.3 2.75510204081633 234 18 71.6 0 703 2 1 234 AFX73090.1 elongation factor 2 alpha, partial [Chaos carolinense] diamond 2700 445 0.991011235955056 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
18598704 18598704 PRJNA770826_P_NODE_4135_length_424_cov_2.080000_g3964_i0 PRJNA770826 4135 424 2.08 8.8192 Pyxidicula operculata 1078852 Tubulinea other_Eukaryota 556 7.099999999999998e-154   NTclustered gi|345452598|gb|JF694317.1| 1078852 g3964 i0 90.521 99.6556603773585 422 38 99 2 4 424 526 106 Pyxidicula operculata clone 2 actin gene, partial cds blastn 42254 556 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida   Pyxidicula Pyxidicula operculata
21608888 21608888 PRJNA770826_P_NODE_857_length_901_cov_2.095070_g744_i0 PRJNA770826 857 901 2.09507 18.8765807 Amoeba proteus 5775 Tubulinea other_Eukaryota 546 1.0899999999999999e-193   NR AAP88974.1 5775 g744 i0 87.8 0.985571587125416 296 36 98.6 0 12 899 91 386 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 888 546 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
22424281 22424281 PRJNA770826_P_NODE_618_length_1031_cov_28.478615_g425_i3 PRJNA770826 618 1031 28.478615 293.61452065 Copromyxa protea 931554 Tubulinea other_Eukaryota 821 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g425 i3 81.172 3.64403491755577 1041 179 99 15 4 1031 1040 4 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 3757 821 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
23699858 23699858 PRJNA770826_P_NODE_2419_length_559_cov_3.031373_g2252_i0 PRJNA770826 2419 559 3.031373 16.94537507 Pyxidicula operculata 1078852 Tubulinea other_Eukaryota 1005 0   NTclustered gi|345294028|gb|JF694284.1| 1078852 g2252 i0 99.106 76.5366726296959 559 5 100 0 1 559 771 213 Pyxidicula operculata small subunit ribosomal RNA gene, partial sequence blastn 42784 1005 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida   Pyxidicula Pyxidicula operculata
26831812 26831812 PRJNA770826_P_NODE_18161_length_190_cov_1.106383_g17990_i0 PRJNA770826 18161 190 1.106383 2.1021277 Amoeba proteus 5775 Tubulinea other_Eukaryota 102 9.92e-24   NR AOW71840.1 5775 g17990 i0 75.8 0.978947368421053 62 15 97.9 0 188 3 99 160 AOW71840.1 bacterial recombinase A, partial [Amoeba proteus] diamond 186 102 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
30338107 30338107 PRJNA770826_P_NODE_6232_length_335_cov_0.909091_g6061_i0 PRJNA770826 6232 335 0.909091 3.04545485 Amoeba proteus 5775 Tubulinea other_Eukaryota 199 1.3999999999999997e-56   NR AAD33718.1 5775 g6061 i0 90.1 0.994029850746269 111 11 99.4 0 1 333 730 840 AAD33718.1 myosin heavy chain [Amoeba proteus] diamond 333 199 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
31105348 31105348 PRJNA770826_P_NODE_11715_length_235_cov_2.602151_g11544_i0 PRJNA770826 11715 235 2.602151 6.11505485 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.9 1.25e-13   NR AFX73093.1 5778 g11544 i0 54.5 4.16170212765957 66 17 84.3 1 198 1 39 91 AFX73093.1 elongation factor 2 alpha, partial [Vermamoeba vermiformis] diamond 978 73.9 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
31570470 31570470 PRJNA770826_P_NODE_12956_length_223_cov_2.011494_g12785_i0 PRJNA770826 12956 223 2.011494 4.48563162 Amoeba proteus 5775 Tubulinea other_Eukaryota 143 3.24e-39   NR AAP88974.1 5775 g12785 i0 89 0.982062780269058 73 8 98.2 0 4 222 1 73 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 219 143 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
31949713 31949713 PRJNA770826_P_NODE_36017_length_165_cov_0.896552_g35846_i0 PRJNA770826 36017 165 0.896552 1.4793108 Chaos carolinense 160823 Tubulinea other_Eukaryota 107 3.36e-28   NR AFX73078.1 160823 g35846 i0 90.9 1 55 5 100 0 1 165 81 135 AFX73078.1 beta-tubulin, partial [Chaos carolinense] diamond 165 107 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
31981323 31981323 PRJNA770826_P_NODE_11138_length_241_cov_1.895833_g10967_i0 PRJNA770826 11138 241 1.895833 4.56895753 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 100 4.96e-24   NR AAY21191.1 5778 g10967 i0 63.6 1.91701244813278 77 28 95.9 0 239 9 145 221 AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] diamond 462 100 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
32013141 32013141 PRJNA770826_P_NODE_6338_length_332_cov_1.102473_g6167_i0 PRJNA770826 6338 332 1.102473 3.66021036 Amoeba proteus 5775 Tubulinea other_Eukaryota 206 4.86e-64   NR AFX84537.1 5775 g6167 i0 86.2 0.984939759036145 109 15 98.5 0 331 5 146 254 AFX84537.1 alpha tubulin, partial [Amoeba proteus] diamond 327 206 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32361407 32361407 PRJNA770826_P_NODE_25359_length_168_cov_1.310924_g25188_i0 PRJNA770826 25359 168 1.310924 2.20235232 Amoeba proteus 5775 Tubulinea other_Eukaryota 77 9.73e-15   NR AAD37351.1 5775 g25188 i0 63 0.964285714285714 54 20 96.4 0 2 163 99 152 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 162 77 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32676829 32676829 PRJNA770826_P_NODE_36220_length_164_cov_1.356522_g36049_i0 PRJNA770826 36220 164 1.356522 2.22469608 Amoeba proteus 5775 Tubulinea other_Eukaryota 88.6 6.47e-19   NR AAD37351.1 5775 g36049 i0 79.6 0.98780487804878 54 11 98.8 0 164 3 115 168 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 162 88.6 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;