RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA770361" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770361 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10950416 10950416 PRJNA770361_P_NODE_16169_length_248_cov_0.891429_g16074_i0 PRJNA770361 16169 248 0.891429 2.21074392 Synergistales bacterium 2268201 Bacteria Bacteria 130 1.01e-25   NTclustered gi|2621703689|emb|OY762654.1| 2268201 g16074 i0 94.186 47.6895161290323 86 3 34 2 146 230 446381 446297 MAG: Synergistales bacterium isolate e2a2af2a-30b9-47e3-8e03-f1be080e1666 genome assembly, chromosome: 1 blastn 11827 130 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
30527106 30527106 PRJNA770361_P_NODE_14653_length_251_cov_0.876404_g14558_i0 PRJNA770361 14653 251 0.876404 2.19977404 Synergistaceae bacterium 2053624 Bacteria Bacteria 166 6.42e-48   NR MEA4880595.1 2053624 g14558 i0 95.2 0.99203187250996006 83 4 99.2 0 250 2 162 244 MEA4880595.1 molybdopterin molybdotransferase MoeA [Synergistaceae bacterium] diamond 249 166 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32424458 32424458 PRJNA770361_P_NODE_5639_length_396_cov_1.448916_g5544_i0 PRJNA770361 5639 396 1.448916 5.73770736 Aminobacterium colombiense 81468 Bacteria Bacteria 132 2.62e-36   NR WP_288925378.1 81468 g5544 i0 78.8 0.643939393939394 85 15 64.4 1 394 140 91 172 WP_288925378.1 hypothetical protein [Aminobacterium colombiense] diamond 255 132 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminobacterium Aminobacterium colombiense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;