contig_metadata
15 rows where bioproject = "PRJNA770361", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4574537 | 4574537 | PRJNA770361_P_NODE_12164_length_269_cov_1.520408_g12069_i0 | PRJNA770361 | 12164 | 269 | 1.520408 | 4.08989752 | Spirochaetes bacterium GWC2_52_13 | 1802181 | Bacteria | Bacteria | 160 | 7.4e-46 | NR | OHD31754.1 | 1802181 | g12069 | i0 | 95.5 | 1.98513011152416 | 89 | 4 | 99.3 | 0 | 268 | 2 | 217 | 305 | OHD31754.1 MAG: DNA-directed RNA polymerase subunit alpha [Spirochaetes bacterium GWC2_52_13] | diamond | 534 | 160 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetes bacterium GWC2_52_13 | ||||||
| 5849987 | 5849987 | PRJNA770361_P_NODE_6645_length_363_cov_2.744828_g6550_i0 | PRJNA770361 | 6645 | 363 | 2.744828 | 9.96372564 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 289 | 2.41e-73 | NTclustered | gi|2621785465|emb|OY781923.1| | 2791017 | g6550 | i0 | 81.522 | 14.9862258953168 | 368 | 52 | 99 | 14 | 3 | 362 | 1663172 | 1662813 | MAG: Sphaerochaetaceae bacterium isolate 77f26d43-b2b0-4d0d-8c29-067165085957 genome assembly, chromosome: 1 | blastn | 5440 | 289 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 7125084 | 7125084 | PRJNA770361_P_NODE_16686_length_247_cov_0.896552_g16591_i0 | PRJNA770361 | 16686 | 247 | 0.896552 | 2.21448344 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 162 | 2.39e-46 | NR | MCE1159502.1 | 2053615 | g16591 | i0 | 100 | 0.995951417004049 | 82 | 0 | 99.6 | 0 | 1 | 246 | 245 | 326 | MCE1159502.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Spirochaetia bacterium] | diamond | 246 | 162 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 18598071 | 18598071 | PRJNA770361_P_NODE_14695_length_251_cov_0.876404_g14600_i0 | PRJNA770361 | 14695 | 251 | 0.876404 | 2.19977404 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g14600 | i0 | 100 | 1.99601593625498 | 251 | 0 | 100 | 0 | 1 | 251 | 3268986 | 3268736 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 501 | 464 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 19873179 | 19873179 | PRJNA770361_P_NODE_19336_length_217_cov_4.319444_g19241_i0 | PRJNA770361 | 19336 | 217 | 4.319444 | 9.37319348 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 401 | 1.6499999999999994e-107 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g19241 | i0 | 100 | 131.073732718894 | 217 | 0 | 100 | 0 | 1 | 217 | 1401672 | 1401456 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 28443 | 401 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 21148920 | 21148920 | PRJNA770361_P_NODE_15817_length_249_cov_0.886364_g15722_i0 | PRJNA770361 | 15817 | 249 | 0.886364 | 2.20704636 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g15722 | i0 | 100 | 7.15261044176707 | 249 | 0 | 100 | 0 | 1 | 249 | 3300705 | 3300953 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 1781 | 460 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 26958119 | 26958119 | PRJNA770361_P_NODE_18142_length_244_cov_0.912281_g18047_i0 | PRJNA770361 | 18142 | 244 | 0.912281 | 2.22596564 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 164 | 1.07e-47 | NR | HOE85190.1 | 1972642 | g18047 | i0 | 100 | 0.983606557377049 | 80 | 0 | 98.4 | 0 | 242 | 3 | 185 | 264 | HOE85190.1 dihydroorotase [Sphaerochaeta sp.] | diamond | 240 | 164 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 27062792 | 27062792 | PRJNA770361_P_NODE_17522_length_245_cov_0.906977_g17427_i0 | PRJNA770361 | 17522 | 245 | 0.906977 | 2.22209365 | Exilispira | 568400 | Bacteria | Bacteria | 147 | 5.52e-39 | NR | MBP7030242.1 | 2202144 | g17427 | i0 | 94.7 | 2.79183673469388 | 76 | 4 | 93.1 | 0 | 2 | 229 | 738 | 813 | MBP7030242.1 transporter substrate-binding domain-containing protein [Spirochaetota bacterium] | diamond | 684 | 147 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27094399 | 27094399 | PRJNA770361_P_NODE_18222_length_244_cov_0.906433_g18127_i0 | PRJNA770361 | 18222 | 244 | 0.906433 | 2.21169652 | Sphaerochaeta | 399320 | Bacteria | Bacteria | 122 | 9.679999999999999e-32 | NR | MEA5033699.1 | 1972642 | g18127 | i0 | 85.1 | 1.81967213114754 | 74 | 11 | 91 | 0 | 23 | 244 | 1 | 74 | MEA5033699.1 FtsH protease activity modulator HflK [Sphaerochaeta sp.] | diamond | 444 | 122 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 27590556 | 27590556 | PRJNA770361_P_NODE_6404_length_370_cov_1.313131_g6309_i0 | PRJNA770361 | 6404 | 370 | 1.313131 | 4.8585847 | Leptospirales bacterium | 2604146 | Bacteria | Bacteria | 112 | 4.76e-28 | NR | MEQ9363317.1 | 2604146 | g6309 | i0 | 40 | 3.95675675675676 | 125 | 73 | 99.7 | 1 | 369 | 1 | 24 | 148 | MEQ9363317.1 TRAP transporter TatT component family protein [Leptospirales bacterium] | diamond | 1464 | 112 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospirales bacterium | ||||
| 28389231 | 28389231 | PRJNA770361_P_NODE_2566_length_591_cov_1.113900_g2472_i0 | PRJNA770361 | 2566 | 591 | 1.1139 | 6.583149 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 173 | 2.64e-46 | NR | HNF27341.1 | 2026757 | g2472 | i0 | 49.7 | 8.05583756345178 | 199 | 96 | 99.5 | 3 | 588 | 1 | 465 | 662 | HNF27341.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 4761 | 173 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 29232301 | 29232301 | PRJNA770361_P_NODE_17609_length_245_cov_0.906977_g17514_i0 | PRJNA770361 | 17609 | 245 | 0.906977 | 2.22209365 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 167 | 1.45e-50 | NR | MDI9386965.1 | 2202144 | g17514 | i0 | 97.5 | 0.991836734693878 | 81 | 2 | 99.2 | 0 | 1 | 243 | 128 | 208 | MDI9386965.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein [Spirochaetota bacterium] | diamond | 243 | 167 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30442100 | 30442100 | PRJNA770361_P_NODE_12913_length_260_cov_1.251337_g12818_i0 | PRJNA770361 | 12913 | 260 | 1.251337 | 3.2534762 | Bacteria | 2 | Bacteria | Bacteria | 116 | 1.07e-29 | NR | MBO4759740.1 | 1898206 | g12818 | i0 | 61.6 | 8.87307692307692 | 86 | 33 | 99.2 | 0 | 260 | 3 | 86 | 171 | MBO4759740.1 glucosamine-6-phosphate deaminase [Spirochaetaceae bacterium] | diamond | 2307 | 117 | 0.991452991452991 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 30811482 | 30811482 | PRJNA770361_P_NODE_13134_length_257_cov_1.695652_g13039_i0 | PRJNA770361 | 13134 | 257 | 1.695652 | 4.35782564 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 139 | 3.69e-40 | NR | MEW6547871.1 | 2202144 | g13039 | i0 | 80 | 0.992217898832685 | 85 | 17 | 99.2 | 0 | 3 | 257 | 28 | 112 | MEW6547871.1 hypothetical protein [Spirochaetota bacterium] | diamond | 255 | 139 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 32519604 | 32519604 | PRJNA770361_P_NODE_17679_length_245_cov_0.906977_g17584_i0 | PRJNA770361 | 17679 | 245 | 0.906977 | 2.22209365 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 166 | 1.14e-47 | NR | MDY0304069.1 | 1972642 | g17584 | i0 | 100 | 0.991836734693878 | 81 | 0 | 99.2 | 0 | 3 | 245 | 87 | 167 | MDY0304069.1 ATP-binding protein [Sphaerochaeta sp.] | diamond | 243 | 166 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;