RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770361", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA770361 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27179459 27179459 PRJNA770361_P_NODE_11982_length_272_cov_0.894472_g11887_i0 PRJNA770361 11982 272 0.894472 2.43296384 Thermoplasmata archaeon 1906666 Archaea Archaea 63.9 1.71e-9   NR HLE45617.1 1906666 g11887 i0 56.1 0.628676470588235 57 25 62.9 0 180 10 22 78 HLE45617.1 multicopper oxidase domain-containing protein [Thermoplasmata archaeon] diamond 171 63.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29042925 29042925 PRJNA770361_P_NODE_15748_length_249_cov_0.886364_g15653_i0 PRJNA770361 15748 249 0.886364 2.20704636 Thermoplasmatales archaeon 2268204 Archaea Archaea 154 1.47e-42   NR MCK5029945.1 2268204 g15653 i0 98.8 0.987951807228916 82 1 98.8 0 248 3 410 491 MCK5029945.1 hypothetical protein [Thermoplasmatales archaeon] diamond 246 154 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;