RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA770361", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA770361 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28979791 28979791 PRJNA770361_P_NODE_4288_length_454_cov_2.251969_g4193_i0 PRJNA770361 4288 454 2.251969 10.22393926 Paraphysoderma sedebokerense 1500003 Fungi Fungi 76.3 7.18e-13   NR KAI9145206.1 1500003 g4193 i0 31.3 0.991189427312775 150 97 95.8 3 12 446 418 566 KAI9145206.1 Cullin [Paraphysoderma sedebokerense] diamond 450 76.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
30527098 30527098 PRJNA770361_P_NODE_11393_length_279_cov_1.665049_g11298_i0 PRJNA770361 11393 279 1.665049 4.64548671 Paraphysoderma sedebokerense 1500003 Fungi Fungi 67.8 4.22e-11   NR KAI9135807.1 1500003 g11298 i0 58.8 0.548387096774194 51 21 54.8 0 157 5 80 130 KAI9135807.1 hypothetical protein BKA69DRAFT_1108330 [Paraphysoderma sedebokerense] diamond 153 67.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31222053 31222053 PRJNA770361_P_NODE_14835_length_251_cov_0.876404_g14740_i0 PRJNA770361 14835 251 0.876404 2.19977404 Paraphysoderma sedebokerense 1500003 Fungi Fungi 67.4 7.9e-12   NR KAI9140803.1 1500003 g14740 i0 40.3 5.72509960159363 72 42 84.9 1 250 38 57 128 KAI9140803.1 hypothetical protein BKA69DRAFT_1077814 [Paraphysoderma sedebokerense] diamond 1437 67.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;