RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770361", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA770361 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2022361 2022361 PRJNA770361_P_NODE_16662_length_247_cov_0.896552_g16567_i0 PRJNA770361 16662 247 0.896552 2.21448344 Armatimonadota bacterium 2033014 Bacteria Bacteria 157 9.47e-45   NR NQV18778.1 2033014 g16567 i0 98.8 0.97165991902834 80 1 97.2 0 3 242 265 344 NQV18778.1 N-acetylmuramoyl-L-alanine amidase [Armatimonadota bacterium] diamond 240 157 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28758533 28758533 PRJNA770361_P_NODE_17207_length_246_cov_0.901734_g17112_i0 PRJNA770361 17207 246 0.901734 2.21826564 Armatimonadota bacterium 2033014 Bacteria Bacteria 134 2.38e-34   NR HPT97507.1 2033014 g17112 i0 76.5 2.96341463414634 81 19 98.8 0 245 3 526 606 HPT97507.1 family 10 glycosylhydrolase [Armatimonadota bacterium] diamond 729 134 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;