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contig_metadata

25 rows where bioproject = "PRJNA770361" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 25 ✖

bioproject 1

  • PRJNA770361 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4574672 4574672 PRJNA770361_P_NODE_18084_length_244_cov_0.912281_g17989_i0 PRJNA770361 18084 244 0.912281 2.22596564 Chlamydomonas 3052 Plants Plants 124 3.5799999999999995e-31   NR GAX76808.1 1157962 g17989 i0 79 4.97950819672131 81 17 99.6 0 1 243 403 483 GAX76808.1 hypothetical protein CEUSTIGMA_g4254.t1 [Chlamydomonas eustigma] diamond 1215 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
8399608 8399608 PRJNA770361_P_NODE_2307_length_625_cov_2.463768_g2213_i0 PRJNA770361 2307 625 2.463768 15.39855 Bracteacoccus minor 50037 Plants Plants 1155 0   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g2213 i0 100 150.92 625 0 100 0 1 625 2911 3535 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 94325 1155 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
9674846 9674846 PRJNA770361_P_NODE_2748_length_571_cov_3.246988_g2654_i0 PRJNA770361 2748 571 3.246988 18.54030148 Monoraphidium neglectum 145388 Plants Plants 176 3.2e-39   NTclustered gi|926783375|ref|XM_014044708.1| 145388 g2654 i0 82.828 12.399299474606 198 32 35 2 281 477 245 49 Monoraphidium neglectum 40S ribosomal protein S27-2 mRNA blastn 7080 176 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
10950298 10950298 PRJNA770361_P_NODE_10169_length_295_cov_2.031532_g10074_i0 PRJNA770361 10169 295 2.031532 5.9930194 Pediastrum duplex 3105 Plants Plants 324 5.26e-84   NTclustered gi|21040380|gb|AF183479.2| 3105 g10074 i0 92.14 73.7016949152542 229 18 98 0 67 295 3139 2911 Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence blastn 21742 324 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
10950371 10950371 PRJNA770361_P_NODE_14069_length_252_cov_0.871508_g13974_i0 PRJNA770361 14069 252 0.871508 2.19620016 Bracteacoccus minor 50037 Plants Plants 466 6.89e-127   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g13974 i0 100 140.678571428571 252 0 100 0 1 252 1185 1436 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 35451 466 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
10950558 10950558 PRJNA770361_P_NODE_7149_length_351_cov_1.122302_g7054_i0 PRJNA770361 7149 351 1.122302 3.93928002 Picochlorum 249344 Plants Plants 79.3 2.01e-14   NR WPT12876.1 1470871 g7054 i0 42.3 3.47008547008547 97 51 82.9 3 297 7 350 441 WPT12876.1 Elongation factor 3 [Picochlorum sp. SENEW3] diamond 1218 79.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
13960347 13960347 PRJNA770361_P_NODE_8251_length_327_cov_1.940945_g8156_i0 PRJNA770361 8251 327 1.940945 6.34689015 Bracteacoccus 50036 Plants Plants 604 1.8799999999999993e-168   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g8156 i0 100 101.085626911315 327 0 100 0 1 327 1937 1611 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 33055 604 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
19873163 19873163 PRJNA770361_P_NODE_1836_length_695_cov_3.562701_g1745_i0 PRJNA770361 1836 695 3.562701 24.76077195 Chlamydomonas reinhardtii 3055 Plants Plants 217 2.33e-51   NTclustered gi|2082265902|ref|XM_043070515.1| 3055 g1745 i0 84.793 6.92230215827338 217 31 31 2 293 508 403 188 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_15g635600v5), mRNA blastn 4811 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24973134 24973134 PRJNA770361_P_NODE_960_length_937_cov_2.027778_g889_i0 PRJNA770361 960 937 2.027778 19.00027986 Bracteacoccus minor 50037 Plants Plants 1720 0   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g889 i0 99.787 127.748132337247 937 2 100 0 1 937 2876 1940 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 119700 1720 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
25433041 25433041 PRJNA770361_P_NODE_2240_length_636_cov_2.934281_g2147_i0 PRJNA770361 2240 636 2.934281 18.66202716 Bracteacoccus 50036 Plants Plants 863 0   NTclustered gi|6119992|gb|AF183452.1| 50037 g2147 i0 99.787 73.8993710691824 470 1 74 0 1 470 1434 1903 Bracteacoccus minor strain UTEX 66 28S ribosomal RNA gene, partial sequence blastn 47000 863 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
26831787 26831787 PRJNA770361_P_NODE_5501_length_401_cov_1.664634_g5406_i0 PRJNA770361 5501 401 1.664634 6.67518234 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 62.4 2.74e-8   NR KAF6257747.1 2650976 g5406 i0 37 2.07980049875312 92 57 68.8 1 314 39 203 293 KAF6257747.1 RNA polymerase I-associated factor PAF67-domain-containing protein [Scenedesmus sp. NREL 46B-D3] diamond 834 62.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
26989735 26989735 PRJNA770361_P_NODE_18162_length_244_cov_0.912281_g18067_i0 PRJNA770361 18162 244 0.912281 2.22596564 Scenedesmus sp. PABB 2909984 Plants Plants 143 1.89e-37   NR KAF8057109.1 2742167 g18067 i0 74.1 4.97950819672131 81 21 99.6 0 243 1 1133 1213 KAF8057109.1 ccp1 [Scenedesmus sp. PABB004] diamond 1215 143 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
27147637 27147637 PRJNA770361_P_NODE_14902_length_250_cov_1.322034_g14807_i0 PRJNA770361 14902 250 1.322034 3.305085 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 74.7 1.67e-13   NR KAG7674596.1 1650286 g14807 i0 53.8 1.44 65 30 78 0 2 196 163 227 KAG7674596.1 hypothetical protein KSW81_000245 [Chlorella desiccata (nom. nud.)] diamond 360 74.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27811593 27811593 PRJNA770361_P_NODE_8844_length_317_cov_1.614754_g8749_i0 PRJNA770361 8844 317 1.614754 5.11877018 Tetrabaena socialis 47790 Plants Plants 63.2 9.27e-10   NR PNG62833.1 47790 g8749 i0 47.6 0.77602523659306 82 35 71.9 3 234 7 73 152 PNG62833.1 hypothetical protein TSOC_015454, partial [Tetrabaena socialis] diamond 246 63.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
28357536 28357536 PRJNA770361_P_NODE_13006_length_259_cov_1.193548_g12911_i0 PRJNA770361 13006 259 1.193548 3.09128932 Eukaryota 2759 Plants Plants 46.6 9.13e-4   NR GAX81483.1 1157962 g12911 i0 42.4 1.96911196911197 59 30 64.9 2 216 49 78 135 GAX81483.1 hypothetical protein CEUSTIGMA_g8912.t1 [Chlamydomonas eustigma] diamond 510 47 0.991489361702128 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
29074517 29074517 PRJNA770361_P_NODE_13188_length_257_cov_1.222826_g13093_i0 PRJNA770361 13188 257 1.222826 3.14266282 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 97.8 1.87e-21   NR KAG7666642.1 1650286 g13093 i0 62.2 1.91439688715953 82 31 95.7 0 255 10 71 152 KAG7666642.1 hypothetical protein KSW81_000415 [Chlorella desiccata (nom. nud.)] diamond 492 97.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
29232303 29232303 PRJNA770361_P_NODE_18729_length_242_cov_1.485207_g18634_i0 PRJNA770361 18729 242 1.485207 3.59420094 Raphidocelis subcapitata 307507 Plants Plants 89.7 3.4e-20   NR GBF87836.1 307507 g18634 i0 61 2.81404958677686 77 28 93 1 226 2 2 78 GBF87836.1 40S ribosomal protein S7 [Raphidocelis subcapitata] diamond 681 89.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
29610758 29610758 PRJNA770361_P_NODE_18870_length_242_cov_0.923077_g18775_i0 PRJNA770361 18870 242 0.923077 2.23384634 Tetradesmus obliquus 3088 Plants Plants 86.3 1.79e-17   NR WIA36023.1 3088 g18775 i0 54.8 3.6198347107438 73 33 90.5 0 12 230 1876 1948 WIA36023.1 hypothetical protein OEZ86_007385 [Tetradesmus obliquus] diamond 876 86.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29673917 29673917 PRJNA770361_P_NODE_7910_length_334_cov_1.662835_g7815_i0 PRJNA770361 7910 334 1.662835 5.5538689 Haematococcus lacustris 44745 Plants Plants 79 2.27e-14   NR KAJ9512917.1 44745 g7815 i0 41.5 3.24251497005988 94 52 84.4 2 333 52 651 741 KAJ9512917.1 hypothetical protein QJQ45_029067 [Haematococcus lacustris] diamond 1083 79 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30179468 30179468 PRJNA770361_P_NODE_11012_length_284_cov_1.478673_g10917_i0 PRJNA770361 11012 284 1.478673 4.19943132 Picochlorum sp. BPE23 2696299 Plants Plants 80.1 4.37e-15   NR KAI8112067.1 2696299 g10917 i0 42.6 1.92253521126761 94 52 97.2 1 282 7 359 452 KAI8112067.1 hypothetical protein M9434_003391 [Picochlorum sp. BPE23] diamond 546 80.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
30179470 30179470 PRJNA770361_P_NODE_12072_length_270_cov_1.583756_g11977_i0 PRJNA770361 12072 270 1.583756 4.2761412 Chlamydomonas sp. UWO 241 1653778 Plants Plants 86.3 7.64e-18   NR KAG1661028.1 1653778 g11977 i0 76.4 3.82222222222222 55 13 61.1 0 105 269 5 59 KAG1661028.1 hypothetical protein FOA52_005343 [Chlamydomonas sp. UWO 241] diamond 1032 86.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
30442099 30442099 PRJNA770361_P_NODE_10593_length_290_cov_1.078341_g10498_i0 PRJNA770361 10593 290 1.078341 3.1271889 Eukaryota 2759 Plants Plants 49.3 3.2e-4   NR KAF5830833.1 3046 g10498 i0 45.5 2.98965517241379 55 30 56.9 0 281 117 2 56 KAF5830833.1 hypothetical protein DUNSADRAFT_13981 [Dunaliella salina] diamond 867 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31263566 31263566 PRJNA770361_P_NODE_4935_length_423_cov_1.782857_g4840_i0 PRJNA770361 4935 423 1.782857 7.54148511 Eukaryota 2759 Plants Plants 170 8.95e-49   NR KAK2079369.1 3111 g4840 i0 56 2.78014184397163 134 59 95 0 421 20 209 342 KAK2079369.1 hypothetical protein QBZ16_003060 [Prototheca wickerhamii] diamond 1176 171 0.994152046783626 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
31412127 31412127 PRJNA770361_P_NODE_8616_length_321_cov_1.258065_g8521_i0 PRJNA770361 8616 321 1.258065 4.03838865 Chlamydomonas schloesseri 2026947 Plants Plants 144 2.4099999999999997e-37   NR KAG2448406.1 2026947 g8521 i0 58.3 1.07476635514019 115 40 100 1 321 1 270 384 KAG2448406.1 hypothetical protein HYH02_006298 [Chlamydomonas schloesseri] diamond 345 144 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri
31602011 31602011 PRJNA770361_P_NODE_13036_length_258_cov_1.686486_g12941_i0 PRJNA770361 13036 258 1.686486 4.35113388 Coccomyxa viridis 1274662 Plants Plants 81.6 9.28e-16   NR CAL5229148.1 1274662 g12941 i0 81.1 3.75581395348837 53 10 61.6 0 159 1 80 132 CAL5229148.1 g12422 [Coccomyxa viridis] diamond 969 81.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;