RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA770361", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA770361 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746389 746389 PRJNA770361_P_NODE_2161_length_647_cov_1.710801_g2068_i0 PRJNA770361 2161 647 1.710801 11.06888247 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 218 2.05e-61   NR KAF4694335.1 32597 g2068 i0 52.2 1.8500772797527 203 97 94.1 0 613 5 25 227 KAF4694335.1 DUF895 domain membrane protein [Perkinsus olseni] diamond 1197 218 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
746452 746452 PRJNA770361_P_NODE_5961_length_384_cov_3.286174_g5866_i0 PRJNA770361 5961 384 3.286174 12.61890816 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 106 2.77e-18   NTclustered gi|294874782|ref|XM_002767050.1| 423536 g5866 i0 93.056 0.286458333333333 72 5 19 0 233 304 79 8 Perkinsus marinus ATCC 50983 60S ribosomal protein L29, putative, mRNA blastn 110 106 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30558553 30558553 PRJNA770361_P_NODE_1773_length_706_cov_1.009479_g1682_i0 PRJNA770361 1773 706 1.009479 7.12692174 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 60.5 1.11e-6   NR KAF4650300.1 330153 g1682 i0 26.6 1.47875354107649 169 103 71.8 3 189 695 172 319 KAF4650300.1 hypothetical protein FOL47_001262 [Perkinsus chesapeaki] diamond 1044 60.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
32623478 32623478 PRJNA770361_P_NODE_8360_length_325_cov_1.742063_g8265_i0 PRJNA770361 8360 325 1.742063 5.66170475 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 126 4.88e-31   NR KAF4675905.1 32597 g8265 i0 53.7 15.8030769230769 108 50 99.7 0 325 2 756 863 KAF4675905.1 SRSF protein kinase 2 [Perkinsus olseni] diamond 5136 127 0.992125984251969 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;