RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770361", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA770361 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30843240 30843240 PRJNA770361_P_NODE_9114_length_313_cov_0.904167_g9019_i0 PRJNA770361 9114 313 0.904167 2.83004271 Rhodothermales bacterium 2306054 Bacteria Bacteria 145 3.96e-39   NR MEX0748062.1 2306054 g9019 i0 68.3 2.92332268370607 101 32 96.8 0 3 305 128 228 MEX0748062.1 phosphoglycerate dehydrogenase [Rhodothermales bacterium] diamond 915 145 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31538753 31538753 PRJNA770361_P_NODE_14196_length_252_cov_0.871508_g14101_i0 PRJNA770361 14196 252 0.871508 2.19620016 Rubricoccus marinus 716817 Bacteria Bacteria 56.6 5.16e-7   NR WP_179271042.1 716817 g14101 i0 50 0.523809523809524 44 22 52.4 0 251 120 408 451 WP_179271042.1 wax ester/triacylglycerol synthase family O-acyltransferase [Rubricoccus marinus] diamond 132 56.6 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubricoccus Rubricoccus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;