contig_metadata
13 rows where bioproject = "PRJNA770361", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5849860 | 5849860 | PRJNA770361_P_NODE_17165_length_246_cov_0.901734_g17070_i0 | PRJNA770361 | 17165 | 246 | 0.901734 | 2.21826564 | FCB group | 1783270 | Bacteria | Bacteria | 162 | 1.5599999999999998e-45 | NR | HKG33877.1 | 2448054 | g17070 | i0 | 93.8 | 23.6585365853659 | 81 | 5 | 98.8 | 0 | 245 | 3 | 340 | 420 | HKG33877.1 phosphoenolpyruvate carboxykinase [Gemmatimonadales bacterium] | diamond | 5820 | 163 | 0.993865030674847 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 8399582 | 8399582 | PRJNA770361_P_NODE_18407_length_243_cov_0.917647_g18312_i0 | PRJNA770361 | 18407 | 243 | 0.917647 | 2.22988221 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 224 | 4.3899999999999996e-54 | NTclustered | gi|575462059|gb|CP007130.1| | 861299 | g18312 | i0 | 84.348 | 1.06172839506173 | 230 | 34 | 94 | 2 | 13 | 241 | 63894 | 63666 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence | blastn | 258 | 224 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 9674933 | 9674933 | PRJNA770361_P_NODE_8348_length_326_cov_0.913043_g8253_i0 | PRJNA770361 | 8348 | 326 | 0.913043 | 2.97652018 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 228 | 4.739999999999999e-55 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g8253 | i0 | 86.19 | 0.644171779141104 | 210 | 29 | 64 | 0 | 1 | 210 | 4024000 | 4023791 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 210 | 228 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16509283 | 16509283 | PRJNA770361_P_NODE_16613_length_247_cov_0.896552_g16518_i0 | PRJNA770361 | 16613 | 247 | 0.896552 | 2.21448344 | Gemmatimonas | 173479 | Bacteria | Bacteria | 289 | 1.56e-73 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g16518 | i0 | 88.163 | 22.7651821862348 | 245 | 26 | 99 | 3 | 4 | 247 | 295 | 53 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 5623 | 289 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 22423591 | 22423591 | PRJNA770361_P_NODE_14538_length_251_cov_0.876404_g14443_i0 | PRJNA770361 | 14538 | 251 | 0.876404 | 2.19977404 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 185 | 2.1499999999999994e-42 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g14443 | i0 | 86.207 | 0.693227091633466 | 174 | 20 | 69 | 2 | 80 | 251 | 2453562 | 2453391 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 174 | 185 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 22423652 | 22423652 | PRJNA770361_P_NODE_17418_length_245_cov_0.906977_g17323_i0 | PRJNA770361 | 17418 | 245 | 0.906977 | 2.22209365 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 164 | 1.3899999999999999e-46 | NR | MEO7985198.1 | 2448054 | g17323 | i0 | 97.5 | 12.8938775510204 | 81 | 2 | 99.2 | 0 | 244 | 2 | 159 | 239 | MEO7985198.1 sigma-54 dependent transcriptional regulator [Gemmatimonadales bacterium] | diamond | 3159 | 164 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 26895247 | 26895247 | PRJNA770361_P_NODE_17041_length_246_cov_0.901734_g16946_i0 | PRJNA770361 | 17041 | 246 | 0.901734 | 2.21826564 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 89.7 | 9.85e-20 | NR | HEV8178341.1 | 2448054 | g16946 | i0 | 70.8 | 4.84146341463415 | 65 | 19 | 79.3 | 0 | 199 | 5 | 9 | 73 | HEV8178341.1 YceI family protein [Gemmatimonadales bacterium] | diamond | 1191 | 89.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28063896 | 28063896 | PRJNA770361_P_NODE_14365_length_252_cov_0.871508_g14270_i0 | PRJNA770361 | 14365 | 252 | 0.871508 | 2.19620016 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 93.2 | 1.97e-21 | NR | HEU0079964.1 | 3047548 | g14270 | i0 | 67.1 | 1.98809523809524 | 82 | 26 | 97.6 | 1 | 247 | 2 | 96 | 176 | HEU0079964.1 HigA family addiction module antitoxin [Longimicrobiaceae bacterium] | diamond | 501 | 93.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 28253314 | 28253314 | PRJNA770361_P_NODE_10586_length_290_cov_1.170507_g10491_i0 | PRJNA770361 | 10586 | 290 | 1.170507 | 3.3944703 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 144 | 1.04e-39 | NR | HEX7243553.1 | 3047548 | g10491 | i0 | 72.9 | 1.98620689655172 | 96 | 26 | 99.3 | 0 | 3 | 290 | 103 | 198 | HEX7243553.1 6-bladed beta-propeller [Longimicrobiaceae bacterium] | diamond | 576 | 144 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 28474447 | 28474447 | PRJNA770361_P_NODE_15866_length_249_cov_0.863636_g15771_i0 | PRJNA770361 | 15866 | 249 | 0.863636 | 2.15045364 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 178 | 1.11e-51 | NR | HEX2611477.1 | 2448054 | g15771 | i0 | 92.6 | 1.95180722891566 | 81 | 6 | 97.6 | 0 | 247 | 5 | 217 | 297 | HEX2611477.1 DUF5916 domain-containing protein [Gemmatimonadales bacterium] | diamond | 486 | 178 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30527109 | 30527109 | PRJNA770361_P_NODE_16513_length_247_cov_0.896552_g16418_i0 | PRJNA770361 | 16513 | 247 | 0.896552 | 2.21448344 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 162 | 1.68e-44 | NR | HEX2637170.1 | 2448054 | g16418 | i0 | 98.8 | 0.983805668016194 | 81 | 1 | 98.4 | 0 | 3 | 245 | 105 | 185 | HEX2637170.1 outer membrane protein assembly factor BamA [Gemmatimonadales bacterium] | diamond | 243 | 162 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30726271 | 30726271 | PRJNA770361_P_NODE_15774_length_249_cov_0.886364_g15679_i0 | PRJNA770361 | 15774 | 249 | 0.886364 | 2.20704636 | Bacteria | 2 | Bacteria | Bacteria | 158 | 2.31e-47 | NR | MDP9348752.1 | 2026742 | g15679 | i0 | 84.3 | 1.98795180722892 | 83 | 13 | 100 | 0 | 249 | 1 | 14 | 96 | MDP9348752.1 L,D-transpeptidase [Gemmatimonadota bacterium] | diamond | 495 | 158 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31538756 | 31538756 | PRJNA770361_P_NODE_16276_length_248_cov_0.891429_g16181_i0 | PRJNA770361 | 16276 | 248 | 0.891429 | 2.21074392 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 138 | 1.63e-38 | NR | HEX2187483.1 | 3047548 | g16181 | i0 | 82.7 | 0.979838709677419 | 81 | 14 | 98 | 0 | 6 | 248 | 77 | 157 | HEX2187483.1 CPBP family intramembrane glutamic endopeptidase [Longimicrobiaceae bacterium] | diamond | 243 | 138 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;