RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770361", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA770361 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27021633 27021633 PRJNA770361_P_NODE_17242_length_246_cov_0.901734_g17147_i0 PRJNA770361 17242 246 0.901734 2.21826564 Candidatus Cloacimonas sp. 2053534 Bacteria Bacteria 117 8.53e-29   NR HAN40328.1 2053534 g17147 i0 98.2 0.695121951219512 57 1 69.5 0 173 3 1 57 HAN40328.1 phosphomannomutase [Candidatus Cloacimonas sp.] diamond 171 117 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp.
28578815 28578815 PRJNA770361_P_NODE_10007_length_298_cov_1.386667_g9912_i0 PRJNA770361 10007 298 1.386667 4.13226766 Candidatus Cloacimonas 456826 Bacteria Bacteria 112 2.24e-26   NR MDD3869011.1 2030808 g9912 i0 45.9 3.94630872483221 98 53 98.7 0 296 3 329 426 MDD3869011.1 L-glutamate gamma-semialdehyde dehydrogenase [Candidatus Cloacimonadota bacterium] diamond 1176 112 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;