RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA770361", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA770361 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26736281 26736281 PRJNA770361_P_NODE_16241_length_248_cov_0.891429_g16146_i0 PRJNA770361 16241 248 0.891429 2.21074392 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 134 1.8199999999999999e-34   NR HET9882302.1 2838779 g16146 i0 89 1.98387096774194 82 9 99.2 0 246 1 973 1054 HET9882302.1 efflux RND transporter permease subunit [Candidatus Binatia bacterium] diamond 492 134 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32013090 32013090 PRJNA770361_P_NODE_14018_length_252_cov_0.871508_g13923_i0 PRJNA770361 14018 252 0.871508 2.19620016 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 76.6 1.18e-15   NR HTW89352.1 2785449 g13923 i0 55.1 1.70238095238095 69 31 82.1 0 45 251 10 78 HTW89352.1 response regulator [Candidatus Binataceae bacterium] diamond 429 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;