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contig_metadata

27 rows where bioproject = "PRJNA770361" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 27 ✖

bioproject 1

  • PRJNA770361 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3297640 3297640 PRJNA770361_P_NODE_423_length_1337_cov_3.840190_g388_i0 PRJNA770361 423 1337 3.84019 51.3433403 Paramoeba branchiphila 308475 Discosea other_Eukaryota 815 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g388 i0 78.969 94.1039640987285 1203 245 90 7 38 1236 2 1200 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 125817 815 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
5849829 5849829 PRJNA770361_P_NODE_15465_length_249_cov_0.886364_g15370_i0 PRJNA770361 15465 249 0.886364 2.20704636 Heterostelium album 2086695 Evosea other_Eukaryota 252 2.07e-62   NTclustered gi|1160555578|ref|XM_020573614.1| 670386 g15370 i0 85.081 98.0562248995984 248 36 99 1 2 249 805 559 Polysphondylium pallidum PN500 actin partial mRNA blastn 24416 252 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
5849857 5849857 PRJNA770361_P_NODE_1705_length_718_cov_3.951938_g1614_i0 PRJNA770361 1705 718 3.951938 28.37491484 Heterostelium album PN5 2086695 Evosea other_Eukaryota 310 4.4599999999999996e-104   NR XP_020430508.1 670386 g1614 i0 74.6 5.64066852367688 193 49 80.6 0 88 666 1 193 XP_020430508.1 Rho GTPase [Heterostelium album PN500] diamond 4050 310 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
8399597 8399597 PRJNA770361_P_NODE_1907_length_684_cov_1.785597_g1815_i0 PRJNA770361 1907 684 1.785597 12.21348348 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 867 0   NTclustered gi|221185864|gb|FJ577811.1| 590481 g1815 i0 94.964 45.4488304093567 556 22 81 6 132 684 1 553 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 31087 867 1 Eukaryota Amoebozoa             uncultured Amoebozoa
9674732 9674732 PRJNA770361_P_NODE_14228_length_252_cov_0.871508_g14133_i0 PRJNA770361 14228 252 0.871508 2.19620016 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g14133 i0 100 0.111111111111111 28 0 11 0 155 182 406 433 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
12225982 12225982 PRJNA770361_P_NODE_13930_length_252_cov_1.307263_g13835_i0 PRJNA770361 13930 252 1.307263 3.29430276 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 228 3.5399999999999984e-55   NTclustered gi|470377128|ref|XM_004333304.1| 1257118 g13835 i0 83.2 4.95238095238095 250 40 99 2 4 252 327 79 Acanthamoeba castellanii str. Neff glutathione S-transferase family protein, putative (ACA1_190760), partial mRNA blastn 1248 228 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13500196 13500196 PRJNA770361_P_NODE_5271_length_410_cov_1.824926_g5176_i0 PRJNA770361 5271 410 1.824926 7.4821966 Badhamia melanospora 1346252 Evosea other_Eukaryota 289 2.7599999999999996e-73   NTclustered gi|2440757455|gb|OP616491.1| 1346252 g5176 i0 80.811 83.880487804878 370 69 90 2 41 409 44 412 Badhamia melanospora voucher LE318160 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 34391 289 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia melanospora
13960310 13960310 PRJNA770361_P_NODE_12371_length_267_cov_1.077320_g12276_i0 PRJNA770361 12371 267 1.07732 2.8764444 Vexillifera 218659 Root_unresolved Root_unresolved 285 2.21e-72   NTclustered gi|221185864|gb|FJ577811.1| 590481 g12276 i0 93.684 55.4007490636704 190 12 71 0 35 224 1648 1837 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 14792 285 1 Eukaryota Amoebozoa             uncultured Amoebozoa
19873260 19873260 PRJNA770361_P_NODE_6936_length_356_cov_1.102473_g6841_i0 PRJNA770361 6936 356 1.102473 3.92480388 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 182 1.66e-52   NR XP_004333784.1 1257118 g6841 i0 73.3 7.8623595505618 116 31 97.8 0 4 351 116 231 XP_004333784.1 methylmalonatesemialdehyde dehydrogenase (acylating), putative [Acanthamoeba castellanii str. Neff] diamond 2799 182 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23699408 23699408 PRJNA770361_P_NODE_6659_length_363_cov_1.527586_g6564_i0 PRJNA770361 6659 363 1.527586 5.54513718 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 161 4.22e-49   NR XP_004352812.1 1257118 g6564 i0 86.4 12.9834710743802 88 12 72.7 0 348 85 1 88 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 4713 162 0.993827160493827 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26609830 26609830 PRJNA770361_P_NODE_2461_length_606_cov_1.046904_g2367_i0 PRJNA770361 2461 606 1.046904 6.34423824 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 47 0.0317   NR XP_641817.1 352472 g2367 i0 25.6 0.618811881188119 125 89 60.4 2 427 62 1038 1161 XP_641817.1 hypothetical protein DDB_G0279365 [Dictyostelium discoideum AX4] diamond 375 47 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27031149 27031149 PRJNA770361_P_NODE_10342_length_293_cov_1.036364_g10247_i0 PRJNA770361 10342 293 1.036364 3.03654652 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 155 1.92e-44   NR AFD36248.1 5755 g10247 i0 74.2 8.76450511945393 97 21 99.3 1 292 2 143 235 AFD36248.1 protein kinase C19 [Acanthamoeba castellanii] diamond 2568 155 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27717044 27717044 PRJNA770361_P_NODE_17064_length_246_cov_0.901734_g16969_i0 PRJNA770361 17064 246 0.901734 2.21826564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.5 1.4e-4   NR XP_004333326.1 1257118 g16969 i0 44.1 0.719512195121951 59 30 68.3 1 168 1 11 69 XP_004333326.1 universal stress domain containing protein [Acanthamoeba castellanii str. Neff] diamond 177 48.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28032514 28032514 PRJNA770361_P_NODE_15965_length_248_cov_0.891429_g15870_i0 PRJNA770361 15965 248 0.891429 2.21074392 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.8 2.99e-20   NR XP_004341763.1 1257118 g15870 i0 70.7 2.70967741935484 75 22 90.7 0 241 17 178 252 XP_004341763.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 672 92.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28705133 28705133 PRJNA770361_P_NODE_3807_length_483_cov_1.560976_g3712_i0 PRJNA770361 3807 483 1.560976 7.53951408 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.5 1.24e-5   NR XP_004356089.1 261658 g3712 i0 30 2.4472049689441 140 84 85.7 5 481 68 132 259 XP_004356089.1 uncharacterized protein DFA_08601 [Cavenderia fasciculata] diamond 1182 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28727024 28727024 PRJNA770361_P_NODE_15007_length_250_cov_0.881356_g14912_i0 PRJNA770361 15007 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.8 5.64e-5   NR XP_004353416.1 1257118 g14912 i0 40 1.56 65 38 76.8 1 21 212 17 81 XP_004353416.1 Activating signal cointegrator protein [Acanthamoeba castellanii str. Neff] diamond 390 50.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29137744 29137744 PRJNA770361_P_NODE_7629_length_340_cov_1.168539_g7534_i0 PRJNA770361 7629 340 1.168539 3.9730326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.8 7.88e-9   NR XP_004347761.1 1257118 g7534 i0 40.2 0.988235294117647 112 61 98.8 4 337 2 1 106 XP_004347761.1 iodothyronine deiodinase [Acanthamoeba castellanii str. Neff] diamond 336 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29642337 29642337 PRJNA770361_P_NODE_17110_length_246_cov_0.901734_g17015_i0 PRJNA770361 17110 246 0.901734 2.21826564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.7 2.03e-10   NR XP_004368103.1 1257118 g17015 i0 40.2 1 82 44 100 1 246 1 57 133 XP_004368103.1 HMG (high mobility group) box domain containing protein [Acanthamoeba castellanii str. Neff] diamond 246 64.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30021793 30021793 PRJNA770361_P_NODE_16771_length_247_cov_0.896552_g16676_i0 PRJNA770361 16771 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 91.3 3.31e-19   NR XP_004337378.1 1257118 g16676 i0 57.3 0.995951417004049 82 35 99.6 0 247 2 131 212 XP_004337378.1 Major Vault Protein repeatcontaining protein [Acanthamoeba castellanii str. Neff] diamond 246 91.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30242926 30242926 PRJNA770361_P_NODE_18832_length_242_cov_0.923077_g18737_i0 PRJNA770361 18832 242 0.923077 2.23384634 Cavenderia fasciculata 261658 Evosea other_Eukaryota 54.3 3.11e-6   NR XP_004356124.1 261658 g18737 i0 41 0.966942148760331 78 44 94.2 2 12 239 268 345 XP_004356124.1 uncharacterized protein DFA_08636 [Cavenderia fasciculata] diamond 234 54.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30432759 30432759 PRJNA770361_P_NODE_5273_length_410_cov_1.670623_g5178_i0 PRJNA770361 5273 410 1.670623 6.8495543 Heterostelium album PN5 2086695 Evosea other_Eukaryota 59.7 2.59e-7   NR XP_020428272.1 670386 g5178 i0 33.6 0.804878048780488 110 72 80.5 1 369 40 24 132 XP_020428272.1 hypothetical protein PPL_10719 [Heterostelium album PN500] diamond 330 59.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
30694711 30694711 PRJNA770361_P_NODE_9413_length_308_cov_0.991489_g9318_i0 PRJNA770361 9413 308 0.991489 3.05378612 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.0118   NR KAF2069820.1 133409 g9318 i0 32.6 3.94480519480519 92 48 76 2 59 292 283 374 KAF2069820.1 hypothetical protein CYY_008858 [Polysphondylium violaceum] diamond 1215 45.4 0.993392070484582 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30716626 30716626 PRJNA770361_P_NODE_1754_length_709_cov_1.608491_g1663_i0 PRJNA770361 1754 709 1.608491 11.40420119 Heterostelium album PN5 2086695 Evosea other_Eukaryota 53.1 5.22e-4   NR XP_020433080.1 670386 g1663 i0 62.5 0.169252468265162 40 15 16.9 0 583 702 851 890 XP_020433080.1 alpha amylase domain-containing protein [Heterostelium album PN500] diamond 120 53.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
31949683 31949683 PRJNA770361_P_NODE_7777_length_337_cov_1.181818_g7682_i0 PRJNA770361 7777 337 1.181818 3.98272666 Dictyostelium purpureum 5786 Evosea other_Eukaryota 66.6 4.66e-10   NR XP_003284908.1 5786 g7682 i0 33.3 0.85459940652819 96 64 85.5 0 49 336 116 211 XP_003284908.1 uncharacterized protein DICPUDRAFT_148761 [Dictyostelium purpureum] diamond 288 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32361367 32361367 PRJNA770361_P_NODE_11219_length_282_cov_1.119617_g11124_i0 PRJNA770361 11219 282 1.119617 3.15731994 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 84.3 1.07e-16   NR KAH3759221.1 1580589 g11124 i0 42.4 1.0531914893617 99 50 97.9 2 2 277 92 190 KAH3759221.1 hypothetical protein Pelo_8949 [Pelomyxa schiedti] diamond 297 84.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32392781 32392781 PRJNA770361_P_NODE_15119_length_250_cov_0.881356_g15024_i0 PRJNA770361 15119 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 110 1.11e-26   NR XP_004341586.1 1257118 g15024 i0 64.2 0.972 81 29 97.2 0 6 248 86 166 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 243 110 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32834375 32834375 PRJNA770361_P_NODE_9560_length_305_cov_1.422414_g9465_i0 PRJNA770361 9560 305 1.422414 4.3383627 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 45.8 0.0065   NR KYQ89566.1 361077 g9465 i0 28.2 0.698360655737705 71 51 69.8 0 281 69 778 848 KYQ89566.1 hypothetical protein DLAC_09518 [Tieghemostelium lacteum] diamond 213 45.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;