RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA768450" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA768450 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18597743 18597743 PRJNA768450_S_NODE_4095_length_312_cov_1.372624_g4046_i0 PRJNA768450 4095 312 1.372624 4.28258688 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 84 1.31e-16   NR MBC7130561.1 2026714 g4046 i0 39.2 0.932692307692308 97 52 86.5 1 33 302 228 324 MBC7130561.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Bathyarchaeota archaeon] diamond 291 84 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29484500 29484500 PRJNA768450_S_NODE_14850_length_190_cov_3.418440_g14801_i0 PRJNA768450 14850 190 3.41844 6.495036 archaeon 1906665 Archaea Archaea 45.8 4.08e-4   NR RYY73917.1 1906665 g14801 i0 78.6 0.442105263157895 28 6 44.2 0 158 75 91 118 RYY73917.1 MAG: 50S ribosomal protein P1 [archaeon] diamond 84 45.8 1 Archaea               archaeon
32392769 32392769 PRJNA768450_S_NODE_14979_length_190_cov_1.078014_g14930_i0 PRJNA768450 14979 190 1.078014 2.0482266 archaeon 1906665 Archaea Archaea 79.7 5.27e-18   NR RYY82745.1 1906665 g14930 i0 93.2 0.694736842105263 44 3 69.5 0 187 56 18 61 RYY82745.1 MAG: hypothetical protein EON63_12740 [archaeon] diamond 132 79.7 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;