RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA768450" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA768450 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8398723 8398723 PRJNA768450_S_NODE_14987_length_190_cov_1.035461_g14938_i0 PRJNA768450 14987 190 1.035461 1.9673759 Drosophila immigrans sigmavirus 1002360 Viruses Viruses 112 5.3e-27   NR AMK09246.1 1002360 g14938 i0 80.6 0.978947368421053 62 12 97.9 0 3 188 1648 1709 AMK09246.1 RNA-dependent RNA polymerase [Drosophila immigrans sigmavirus] diamond 186 112 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sigmavirus Sigmavirus immigrans
30527094 30527094 PRJNA768450_S_NODE_7093_length_252_cov_1.502463_g7044_i0 PRJNA768450 7093 252 1.502463 3.78620676 Drosophila immigrans sigmavirus 1002360 Viruses Viruses 45.1 0.0062   NR YP_009505494.1 1002360 g7044 i0 30.8 2.16666666666667 91 54 100 2 252 1 132 220 YP_009505494.1 PP3 [Drosophila immigrans sigmavirus] diamond 546 45.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sigmavirus Sigmavirus immigrans
30938054 30938054 PRJNA768450_S_NODE_18894_length_174_cov_1.224000_g18845_i0 PRJNA768450 18894 174 1.224 2.12976 Drosophila immigrans sigmavirus 1002360 Viruses Viruses 44.7 0.00262   NR AMK09244.1 1002360 g18845 i0 44.7 0.810344827586207 47 26 81 0 170 30 177 223 AMK09244.1 matrix protein [Drosophila immigrans sigmavirus] diamond 141 44.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sigmavirus Sigmavirus immigrans
31380560 31380560 PRJNA768450_S_NODE_7236_length_250_cov_1.517413_g7187_i0 PRJNA768450 7236 250 1.517413 3.7935325 Drosophila immigrans sigmavirus 1002360 Viruses Viruses 47.8 6.54e-4   NR AMK09243.1 1002360 g7187 i0 32.9 1.968 82 55 98.4 0 250 5 173 254 AMK09243.1 PP3 [Drosophila immigrans sigmavirus] diamond 492 47.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sigmavirus Sigmavirus immigrans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;