RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA768450" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA768450 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2021518 2021518 PRJNA768450_S_NODE_14902_length_190_cov_1.737589_g14853_i0 PRJNA768450 14902 190 1.737589 3.3014191 Benyvirus necrobetae 3427127 Viruses Viruses 346 6.690000000000001e-91   NTclustered gi|1512470163|gb|MH106727.1| 31721 g14853 i0 99.474 17.9210526315789 190 1 100 0 1 190 3008 2819 Beet necrotic yellow vein virus isolate Brazilian segment RNA2, complete sequence blastn 3405 346 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Benyviridae Benyvirus Benyvirus necrobetae
10949591 10949591 PRJNA768450_S_NODE_14709_length_191_cov_1.704225_g14660_i0 PRJNA768450 14709 191 1.704225 3.25506975 Tolivirales sp. 2809914 Viruses Viruses 291 3.2000000000000003e-74   NTclustered gi|2647549457|gb|OR843652.1| 2809914 g14660 i0 95.58 0.947643979057592 181 8 95 0 1 181 1831 1651 Tolivirales sp. strain MR233-17E/2125 polyprotein, tombus P33-like protein, and structural protein genes, complete cds blastn 181 291 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
16048135 16048135 PRJNA768450_S_NODE_16033_length_185_cov_1.308824_g15984_i0 PRJNA768450 16033 185 1.308824 2.4213244 Benyvirus necrobetae 3427127 Viruses Viruses 324 3.03e-84   NTclustered gi|1883421658|gb|MT227165.1| 31721 g15984 i0 98.895 52.5189189189189 181 2 98 0 3 183 648 828 Beet necrotic yellow vein virus strain USA2020 segment RNA2, complete sequence blastn 9716 324 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Benyviridae Benyvirus Benyvirus necrobetae
16048347 16048347 PRJNA768450_S_NODE_21293_length_166_cov_2.358974_g21244_i0 PRJNA768450 21293 166 2.358974 3.91589684 Tolivirales sp. 2809914 Viruses Viruses 279 5.86e-71   NTclustered gi|2647549457|gb|OR843652.1| 2809914 g21244 i0 97.546 2.02409638554217 163 4 98 0 1 163 1490 1652 Tolivirales sp. strain MR233-17E/2125 polyprotein, tombus P33-like protein, and structural protein genes, complete cds blastn 336 279 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
17324094 17324094 PRJNA768450_S_NODE_21534_length_166_cov_1.128205_g21485_i0 PRJNA768450 21534 166 1.128205 1.8728203 Benyvirus necrobetae 3427127 Viruses Viruses 296 5.82e-76   NTclustered gi|1883421658|gb|MT227165.1| 31721 g21485 i0 98.795 27.1987951807229 166 2 100 0 1 166 2141 1976 Beet necrotic yellow vein virus strain USA2020 segment RNA2, complete sequence blastn 4515 296 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Benyviridae Benyvirus Benyvirus necrobetae
19872306 19872306 PRJNA768450_S_NODE_14796_length_191_cov_1.021127_g14747_i0 PRJNA768450 14796 191 1.021127 1.95035257 Benyvirus necrobetae 3427127 Viruses Viruses 350 5.2000000000000014e-92   NTclustered gi|1883421658|gb|MT227165.1| 31721 g14747 i0 100 17.8115183246073 189 0 99 0 3 191 3168 2980 Beet necrotic yellow vein virus strain USA2020 segment RNA2, complete sequence blastn 3402 350 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Benyviridae Benyvirus Benyvirus necrobetae
21148730 21148730 PRJNA768450_S_NODE_8297_length_237_cov_2.319149_g8248_i0 PRJNA768450 8297 237 2.319149 5.49638313 Benyvirus necrobetae 3427127 Viruses Viruses 438 1.4e-118   NTclustered gi|2316779776|gb|OM830522.1| 31721 g8248 i0 100 99.8016877637131 237 0 100 0 1 237 103 339 Beet necrotic yellow vein virus isolate 36-Villalonso-ES coat protein gene, complete cds blastn 23653 438 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Benyviridae Benyvirus Benyvirus necrobetae
23698529 23698529 PRJNA768450_S_NODE_16519_length_183_cov_1.365672_g16470_i0 PRJNA768450 16519 183 1.365672 2.49917976 Tolivirales sp. 2809914 Viruses Viruses 294 2.35e-75   NTclustered gi|2647549457|gb|OR843652.1| 2809914 g16470 i0 95.628 1.54644808743169 183 8 100 0 1 183 3671 3489 Tolivirales sp. strain MR233-17E/2125 polyprotein, tombus P33-like protein, and structural protein genes, complete cds blastn 283 294 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
28727016 28727016 PRJNA768450_S_NODE_14547_length_192_cov_1.412587_g14498_i0 PRJNA768450 14547 192 1.412587 2.71216704 Tolivirales sp. 2809914 Viruses Viruses 102 2.5599999999999998e-23   NR WRQ65315.1 2809914 g14498 i0 87.5 2 64 8 100 0 192 1 84 147 WRQ65315.1 polyprotein [Tolivirales sp.] diamond 384 102 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30621816 30621816 PRJNA768450_S_NODE_11993_length_206_cov_1.732484_g11944_i0 PRJNA768450 11993 206 1.732484 3.56891704 Tolivirales sp. 2809914 Viruses Viruses 71.2 1.96e-13   NR WRQ65126.1 2809914 g11944 i0 75.6 0.597087378640777 41 10 59.7 0 55 177 13 53 WRQ65126.1 hypothetical protein, partial [Tolivirales sp.] diamond 123 71.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;