RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA768450", tax_phylum = "Deferribacterota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 1 ✖

tax_phylum 1

  • Deferribacterota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA768450 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6310284 6310284 PRJNA768450_S_NODE_21025_length_167_cov_1.228814_g20976_i0 PRJNA768450 21025 167 1.228814 2.05211938 Mucispirillum 248038 Bacteria Bacteria 95.3 2.29e-15   NTclustered gi|2211256631|emb|OW091398.1| 248039 g20976 i0 88.095 3.78443113772455 84 4 49 5 55 135 865964 865884 Mucispirillum schaedleri isolate Mucispirillum_schaedleri_DSM104751 genome assembly, chromosome: Mucispirillum_schaedleri_1 blastn 632 95.3 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Mucispirillaceae Mucispirillum Mucispirillum schaedleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;