RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA767802" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA767802 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28411365 28411365 PRJNA767802_P_NODE_4886_length_375_cov_2.322086_g4813_i0 PRJNA767802 4886 375 2.322086 8.7078225 Minisyncoccota bacterium 2053589 Bacteria Bacteria 98.2 5.64e-21   NR MBP9837014.1 2053589 g4813 i0 43.2 2.992 125 65 98.4 4 5 373 249 369 MBP9837014.1 FAD-binding oxidoreductase [Candidatus Paceibacterota bacterium] diamond 1122 98.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28632499 28632499 PRJNA767802_P_NODE_7387_length_281_cov_1.685345_g7314_i0 PRJNA767802 7387 281 1.685345 4.73581945 Minisyncoccota bacterium 2053589 Bacteria Bacteria 168 1.63e-46   NR HEY0220878.1 2053589 g7314 i0 86 2.97864768683274 93 13 99.3 0 279 1 501 593 HEY0220878.1 type I DNA topoisomerase [Candidatus Paceibacterota bacterium] diamond 837 168 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;