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contig_metadata

15 rows where bioproject = "PRJNA767802" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA767802 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5848764 5848764 PRJNA767802_P_NODE_7445_length_279_cov_2.386957_g7372_i0 PRJNA767802 7445 279 2.386957 6.65961003 Ulothrix zonata 43941 Plants Plants 510 3.5299999999999996e-140   NTclustered gi|530445654|emb|HE860533.1| 43941 g7372 i0 99.642 99.8709677419355 279 1 100 0 1 279 37 315 Ulothrix zonata partial 28S rRNA gene, isolate Q19 blastn 27864 510 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Ulotrichaceae Ulothrix Ulothrix zonata
7123927 7123927 PRJNA767802_P_NODE_5166_length_360_cov_2.051447_g5093_i0 PRJNA767802 5166 360 2.051447 7.3852092 Chlamydomonas eustigma 1157962 Plants Plants 169 8.12e-51   NR GAX77325.1 1157962 g5093 i0 68.1 6.94166666666667 119 38 99.2 0 359 3 86 204 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 2499 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
7123954 7123954 PRJNA767802_P_NODE_9706_length_231_cov_5.763736_g9633_i0 PRJNA767802 9706 231 5.763736 13.31423016 Desmochloris halophila 138176 Plants Plants 305 1.43e-78   NTclustered gi|371782086|emb|HE610118.1| 138176 g9633 i0 92.891 92.2121212121212 211 14 91 1 1 211 2792 2583 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 21301 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
10949311 10949311 PRJNA767802_P_NODE_7849_length_269_cov_2.040909_g7776_i0 PRJNA767802 7849 269 2.040909 5.49004521 Sarcinofilum mucosum 141643 Plants Plants 444 3.48e-120   NTclustered gi|1197510887|ref|NC_034709.1| 141643 g7776 i0 96.992 127.07063197026 266 5 100 2 4 269 147462 147200 Trichosarcina mucosa culture SAG:4.90 chloroplast, complete genome blastn 34182 444 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Sarcinofilaceae Sarcinofilum Sarcinofilum mucosum
13498959 13498959 PRJNA767802_P_NODE_4651_length_388_cov_5.477876_g4578_i0 PRJNA767802 4651 388 5.477876 21.25415888 Ulva sp. EE2 707363 Plants Plants 254 9.47e-63   NTclustered gi|284177801|gb|GQ421591.1| 707363 g4578 i0 84.646 7.19587628865979 254 39 65 0 22 275 686 939 Ulva sp. EE2 glyceraldehyde-3-phosphate dehydrogenase (GapA) mRNA, partial cds blastn 2792 254 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva sp. EE2
17783670 17783670 PRJNA767802_P_NODE_5454_length_346_cov_1.730640_g5381_i0 PRJNA767802 5454 346 1.73064 5.9880144 Cephaleuros 173369 Plants Plants 147 1.46e-30   NTclustered gi|2210642948|gb|ON040817.1| 173370 g5381 i0 87.402 36.7052023121387 127 16 37 0 130 256 227 353 Cephaleuros parasiticus isolate Osm7 large subunit ribosomal RNA gene, partial sequence blastn 12700 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Cephaleuros Cephaleuros parasiticus
19057826 19057826 PRJNA767802_P_NODE_7715_length_272_cov_2.076233_g7642_i0 PRJNA767802 7715 272 2.076233 5.64735376 Eukaryota 2759 Plants Plants 113 1.13e-20   NTclustered gi|2082259818|ref|XM_001690833.2| 3055 g7642 i0 80 2.67647058823529 160 27 58 5 52 208 440 597 Chlamydomonas reinhardtii ribosomal protein L18 (CHLRE_12g512600v5), mRNA blastn 728 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
26809723 26809723 PRJNA767802_P_NODE_3661_length_454_cov_12.479012_g3588_i0 PRJNA767802 3661 454 12.479012 56.65471448 Eukaryota 2759 Plants Plants 100 2e-21   NR KAJ9533911.1 44745 g3588 i0 49.1 20.9801762114537 116 57 76.7 2 12 359 1322 1435 KAJ9533911.1 hypothetical protein QJQ45_027003 [Haematococcus lacustris] diamond 9525 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27031147 27031147 PRJNA767802_P_NODE_2002_length_642_cov_3.588533_g1940_i0 PRJNA767802 2002 642 3.588533 23.03838186 Eukaryota 2759 Plants Plants 71.6 9.28e-11   NR GBG00524.1 307507 g1940 i0 34.9 2.9392523364486 126 58 48.6 4 630 319 17 140 GBG00524.1 hypothetical protein Rsub_13363 [Raphidocelis subcapitata] diamond 1887 72 0.994444444444444 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
27242822 27242822 PRJNA767802_P_NODE_7603_length_275_cov_1.911504_g7530_i0 PRJNA767802 7603 275 1.911504 5.256636 Chlorella vulgaris 3077 Plants Plants 79 1.01e-14   NR KAL4858726.1 3077 g7530 i0 46.3 10.9963636363636 82 44 89.5 0 3 248 251 332 KAL4858726.1 Uncharacterized protein ACK3TF_001123 [Chlorella vulgaris] diamond 3024 79 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
27779902 27779902 PRJNA767802_P_NODE_5184_length_359_cov_3.774194_g5111_i0 PRJNA767802 5184 359 3.774194 13.54935646 Monoraphidium neglectum 145388 Plants Plants 73.2 1.68e-12   NR XP_013904743.1 145388 g5111 i0 65.2 1.1949860724234 46 16 38.4 0 142 279 34 79 XP_013904743.1 SNW domain-containing protein 1, partial [Monoraphidium neglectum] diamond 429 73.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
27978785 27978785 PRJNA767802_P_NODE_4585_length_392_cov_2.924198_g4512_i0 PRJNA767802 4585 392 2.924198 11.46285616 Eukaryota 2759 Plants Plants 83.2 5.55e-17   NR KAG2502050.1 47281 g4512 i0 65.6 3.50510204081633 61 17 46.7 1 177 359 119 175 KAG2502050.1 hypothetical protein HYH03_000544 [Edaphochlamys debaryana] diamond 1374 83.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
30401244 30401244 PRJNA767802_P_NODE_12633_length_195_cov_1.397260_g12560_i0 PRJNA767802 12633 195 1.39726 2.724657 Chlamydomonas eustigma 1157962 Plants Plants 56.2 3.14e-8   NR GAX73977.1 1157962 g12560 i0 93.3 0.461538461538462 30 2 46.2 0 2 91 76 105 GAX73977.1 hypothetical protein CEUSTIGMA_g1427.t1 [Chlamydomonas eustigma] diamond 90 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
30938048 30938048 PRJNA767802_P_NODE_12174_length_200_cov_1.615894_g12101_i0 PRJNA767802 12174 200 1.615894 3.231788 Coccomyxa viridis 1274662 Plants Plants 54.7 5.75e-7   NR CAK0785728.1 1274662 g12101 i0 47.8 0.69 46 24 69 0 63 200 109 154 CAK0785728.1 hypothetical protein CVIRNUC_008939 [Coccomyxa viridis] diamond 138 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32234859 32234859 PRJNA767802_P_NODE_10018_length_226_cov_1.728814_g9945_i0 PRJNA767802 10018 226 1.728814 3.90711964 Trebouxia sp. C 2796353 Plants Plants 97.8 8.23e-24   NR KAL0051287.1 2905655 g9945 i0 81.7 5.57522123893805 60 11 79.6 0 21 200 101 160 KAL0051287.1 hypothetical protein WJX82_004969 [Trebouxia sp. C0006] diamond 1260 97.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;