RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA767802", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA767802 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27442375 27442375 PRJNA767802_P_NODE_10303_length_222_cov_2.358382_g10230_i0 PRJNA767802 10303 222 2.358382 5.23560804 Bacillati 1783272 Bacteria Bacteria 47 8.44e-4   NR RMF50237.1 2052143 g10230 i0 39.1 3.40540540540541 64 39 86.5 0 220 29 225 288 RMF50237.1 MAG: hypothetical protein D6755_01440 [Anaerolineae bacterium] diamond 756 47.4 0.991561181434599 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31507149 31507149 PRJNA767802_P_NODE_5736_length_335_cov_2.839161_g5663_i0 PRJNA767802 5736 335 2.839161 9.51118935 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 90.1 6.85e-20   NR MCL0057116.1 2026734 g5663 i0 41.9 4.83582089552239 93 54 83.3 0 312 34 7 99 MCL0057116.1 thioredoxin [Dehalococcoidia bacterium] diamond 1620 90.1 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
32708399 32708399 PRJNA767802_P_NODE_15300_length_171_cov_1.811475_g15227_i0 PRJNA767802 15300 171 1.811475 3.09762225 Anaerolineales bacterium 2073117 Bacteria Bacteria 41.6 0.0361   NR HIE58208.1 2073117 g15227 i0 46.3 0.719298245614035 41 22 71.9 0 170 48 416 456 HIE58208.1 formate--tetrahydrofolate ligase [Anaerolineales bacterium] diamond 123 41.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;