RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA767802" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA767802 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27337804 27337804 PRJNA767802_P_NODE_5763_length_334_cov_3.031579_g5690_i0 PRJNA767802 5763 334 3.031579 10.12547386 Candidatus Rhabdochlamydia sp. 2320511 Bacteria Bacteria 80.1 8.24e-15   NR MFI0477770.1 2320511 g5690 i0 54.1 0.664670658682635 74 34 66.5 0 78 299 25 98 MFI0477770.1 beta strand repeat-containing protein [Candidatus Rhabdochlamydia sp.] diamond 222 80.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia sp.
31759928 31759928 PRJNA767802_P_NODE_2137_length_620_cov_8.173380_g2074_i0 PRJNA767802 2137 620 8.17338 50.674956 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 148 2.87e-39   NR HEY5235189.1 2047756 g2074 i0 48.7 0.745161290322581 154 76 73.5 2 25 480 30 182 HEY5235189.1 nucleotidyltransferase domain-containing protein [Rhabdochlamydiaceae bacterium] diamond 462 148 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;