contig_metadata
21 rows where bioproject = "PRJNA767802" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1206039 | 1206039 | PRJNA767802_P_NODE_6041_length_324_cov_2.018182_g5968_i0 | PRJNA767802 | 6041 | 324 | 2.018182 | 6.53890968 | Bacillus | 1386 | Bacteria | Bacteria | 551 | 2.4599999999999992e-152 | NTclustered | gi|1339799779|gb|CP026522.1| | 1402 | g5968 | i0 | 98.107 | 97.8364197530864 | 317 | 5 | 98 | 1 | 1 | 316 | 3447019 | 3446703 | Bacillus licheniformis strain MBGJa67 chromosome | blastn | 31699 | 551 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus licheniformis | ||
| 2481502 | 2481502 | PRJNA767802_P_NODE_2502_length_570_cov_12.500960_g2435_i0 | PRJNA767802 | 2502 | 570 | 12.50096 | 71.255472 | Bacillati | 1783272 | Bacteria | Bacteria | 989 | 0 | NTclustered | gi|1227448785|gb|CP016766.1| | 1601 | g2435 | i0 | 99.814 | 503.073684210526 | 538 | 1 | 94 | 0 | 13 | 550 | 53794 | 53257 | Ligilactobacillus agilis strain La3 chromosome, complete genome | blastn | 286752 | 989 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Ligilactobacillus | Ligilactobacillus agilis | ||
| 3757864 | 3757864 | PRJNA767802_P_NODE_8223_length_261_cov_1.948113_g8150_i0 | PRJNA767802 | 8223 | 261 | 1.948113 | 5.08457493 | root | 1 | Root_unresolved | Root_unresolved | 472 | 1.54e-128 | NTclustered | gi|1796972337|gb|CP033085.1| | 1280 | g8150 | i0 | 99.234 | 98.7356321839081 | 261 | 2 | 100 | 0 | 1 | 261 | 2741333 | 2741593 | Staphylococcus aureus strain WH3018 chromosome | blastn | 25770 | 472 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 8398340 | 8398340 | PRJNA767802_P_NODE_1407_length_774_cov_2.750345_g1357_i0 | PRJNA767802 | 1407 | 774 | 2.750345 | 21.2876703 | Clostridium carnis | 1530 | Bacteria | Bacteria | 1140 | 0 | NTclustered | gi|301051466|gb|FJ498870.2| | 1530 | g1357 | i0 | 93.299 | 965.005167958656 | 776 | 46 | 100 | 6 | 1 | 774 | 421 | 1192 | Clostridium carnis 23S ribosomal RNA gene, partial sequence | blastn | 746914 | 1140 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium carnis | ||
| 9673663 | 9673663 | PRJNA767802_P_NODE_5288_length_354_cov_4.013115_g5215_i0 | PRJNA767802 | 5288 | 354 | 4.013115 | 14.2064271 | Thermoanaerobacterium sp. RBIITD | 1550240 | Bacteria | Bacteria | 612 | 1.2199999999999996e-170 | NTclustered | gi|1239558912|emb|LT906662.1| | 1550240 | g5215 | i0 | 98.834 | 1.94067796610169 | 343 | 4 | 97 | 0 | 1 | 343 | 3249117 | 3249459 | Thermoanaerobacterium sp. RBIITD genome assembly, chromosome: I | blastn | 687 | 612 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Thermoanaerobacterium | Thermoanaerobacterium sp. RBIITD | ||
| 12224834 | 12224834 | PRJNA767802_P_NODE_16390_length_166_cov_1.307692_g16317_i0 | PRJNA767802 | 16390 | 166 | 1.307692 | 2.17076872 | Thermoanaerobacterium thermosaccharolyticum | 1517 | Bacteria | Bacteria | 257 | 2.7400000000000003e-64 | NTclustered | gi|302777039|gb|CP002171.1| | 580327 | g16317 | i0 | 94.578 | 7.01807228915663 | 166 | 9 | 100 | 0 | 1 | 166 | 2269182 | 2269017 | Thermoanaerobacterium thermosaccharolyticum DSM 571, complete genome | blastn | 1165 | 257 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Thermoanaerobacterium | Thermoanaerobacterium thermosaccharolyticum | ||
| 13960060 | 13960060 | PRJNA767802_P_NODE_5771_length_334_cov_1.880702_g5698_i0 | PRJNA767802 | 5771 | 334 | 1.880702 | 6.28154468 | Sporomusa | 2375 | Bacteria | Bacteria | 217 | 1.06e-51 | NTclustered | gi|2790662264|gb|CP155574.1| | 2376 | g5698 | i0 | 80.565 | 3.67964071856287 | 283 | 53 | 84 | 2 | 28 | 309 | 1993934 | 1993653 | Sporomusa paucivorans strain DSM 3697 chromosome, complete genome | blastn | 1229 | 217 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Sporomusaceae | Sporomusa | Sporomusa paucivorans | ||
| 17783667 | 17783667 | PRJNA767802_P_NODE_3274_length_490_cov_3.061224_g3203_i0 | PRJNA767802 | 3274 | 490 | 3.061224 | 14.9999976 | Staphylococcus | 1279 | Bacteria | Bacteria | 900 | 0 | NTclustered | gi|1714026535|gb|CP031277.1| | 1290 | g3203 | i0 | 99.796 | 473.132653061225 | 490 | 1 | 100 | 0 | 1 | 490 | 708498 | 708009 | Staphylococcus hominis strain 19A chromosome, complete genome | blastn | 231835 | 900 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 19057825 | 19057825 | PRJNA767802_P_NODE_5555_length_342_cov_3.757679_g5482_i0 | PRJNA767802 | 5555 | 342 | 3.757679 | 12.85126218 | Geobacillus | 129337 | Bacteria | Bacteria | 592 | 1.54e-164 | NTclustered | gi|2529062746|gb|CP128458.1| | 1422 | g5482 | i0 | 99.69 | 24.1432748538012 | 323 | 1 | 94 | 0 | 20 | 342 | 3056735 | 3057057 | Geobacillus stearothermophilus strain EF60133 chromosome, complete genome | blastn | 8257 | 592 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus stearothermophilus | ||
| 21147780 | 21147780 | PRJNA767802_P_NODE_4777_length_382_cov_2.417417_g4704_i0 | PRJNA767802 | 4777 | 382 | 2.417417 | 9.23453294 | Neomoorella thermoacetica | 1525 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|1101494508|gb|CP017237.1| | 1525 | g4704 | i0 | 98.143 | 11.6178010471204 | 377 | 7 | 99 | 0 | 6 | 382 | 1571233 | 1571609 | Moorella thermoacetica strain DSM 103284 chromosome, complete genome | blastn | 4438 | 658 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Neomoorellales | Neomoorellaceae | Neomoorella | Neomoorella thermoacetica | ||
| 22422404 | 22422404 | PRJNA767802_P_NODE_10298_length_222_cov_2.653179_g10225_i0 | PRJNA767802 | 10298 | 222 | 2.653179 | 5.89005738 | Neomoorella thermoacetica | 1525 | Bacteria | Bacteria | 398 | 2.2e-106 | NTclustered | gi|2702398649|gb|CP136551.1| | 1525 | g10225 | i0 | 99.095 | 9.96396396396396 | 221 | 2 | 99 | 0 | 1 | 221 | 1933034 | 1932814 | Moorella thermoacetica strain COM chromosome, complete genome | blastn | 2212 | 398 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Neomoorellales | Neomoorellaceae | Neomoorella | Neomoorella thermoacetica | ||
| 22422506 | 22422506 | PRJNA767802_P_NODE_538_length_1199_cov_6.956522_g509_i0 | PRJNA767802 | 538 | 1199 | 6.956522 | 83.40869878 | Aeribacillus | 1055323 | Bacteria | Bacteria | 629 | 4.499999999999998e-216 | NR | WP_327874011.1 | 1868734 | g509 | i0 | 79.1 | 4.84153461217681 | 387 | 81 | 96.8 | 0 | 18 | 1178 | 224 | 610 | WP_327874011.1 formate dehydrogenase subunit alpha [Aeribacillus composti] | diamond | 5805 | 629 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Aeribacillus | Aeribacillus composti | ||
| 22422526 | 22422526 | PRJNA767802_P_NODE_9538_length_234_cov_2.135135_g9465_i0 | PRJNA767802 | 9538 | 234 | 2.135135 | 4.9962159 | Thermoanaerobacterium thermosaccharolyticum | 1517 | Bacteria | Bacteria | 152 | 2.01e-32 | NTclustered | gi|2504358668|gb|CP116033.1| | 1517 | g9465 | i0 | 80.488 | 2.68376068376068 | 205 | 35 | 86 | 5 | 5 | 206 | 897141 | 897343 | Thermoanaerobacterium thermosaccharolyticum strain MJ1 chromosome, complete genome | blastn | 628 | 152 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Thermoanaerobacterium | Thermoanaerobacterium thermosaccharolyticum | ||
| 27622042 | 27622042 | PRJNA767802_P_NODE_2504_length_570_cov_3.397313_g2437_i0 | PRJNA767802 | 2504 | 570 | 3.397313 | 19.3646841 | Paenibacillus sp. HB172176 | 2493690 | Bacteria | Bacteria | 59.3 | 1.08e-6 | NR | WP_240941536.1 | 2493690 | g2437 | i0 | 44.3 | 0.626315789473684 | 61 | 34 | 32.1 | 0 | 382 | 564 | 12 | 72 | WP_240941536.1 hypothetical protein [Paenibacillus sp. HB172176] | diamond | 357 | 59.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. HB172176 | ||
| 28158896 | 28158896 | PRJNA767802_P_NODE_3065_length_510_cov_10.312364_g2994_i0 | PRJNA767802 | 3065 | 510 | 10.312364 | 52.5930564 | Aerococcus sp. 1KP-2 | 1872398 | Bacteria | Bacteria | 291 | 4.6200000000000004e-91 | NR | WP_094518467.1 | 1981982 | g2994 | i0 | 100 | 0.929411764705882 | 158 | 0 | 92.9 | 0 | 18 | 491 | 239 | 396 | WP_094518467.1 ATP-binding cassette domain-containing protein [Aerococcus sp. 1KP-2016] | diamond | 474 | 291 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Aerococcus | Aerococcus sp. 1KP-2016 | ||
| 28379658 | 28379658 | PRJNA767802_P_NODE_10546_length_219_cov_1.500000_g10473_i0 | PRJNA767802 | 10546 | 219 | 1.5 | 3.285 | Fictibacillus aquaticus | 2021314 | Bacteria | Bacteria | 91.7 | 1.5e-19 | NR | WP_094250820.1 | 2021314 | g10473 | i0 | 59.7 | 2.94520547945205 | 72 | 29 | 98.6 | 0 | 217 | 2 | 33 | 104 | WP_094250820.1 flagellar basal-body MS-ring/collar protein FliF [Fictibacillus aquaticus] | diamond | 645 | 91.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Fictibacillaceae | Fictibacillus | Fictibacillus aquaticus | ||
| 29990064 | 29990064 | PRJNA767802_P_NODE_14111_length_181_cov_2.348485_g14038_i0 | PRJNA767802 | 14111 | 181 | 2.348485 | 4.25075785 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 43.9 | 0.00133 | NR | MCS4580470.1 | 1280 | g14038 | i0 | 91.9 | 0.613259668508287 | 37 | 3 | 61.3 | 0 | 178 | 68 | 1 | 37 | MCS4580470.1 hypothetical protein [Staphylococcus aureus] | diamond | 111 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 30653361 | 30653361 | PRJNA767802_P_NODE_15053_length_173_cov_2.467742_g14980_i0 | PRJNA767802 | 15053 | 173 | 2.467742 | 4.26919366 | Lucifera butyrica | 1351585 | Bacteria | Bacteria | 79.3 | 1.31e-16 | NR | WP_122626647.1 | 1351585 | g14980 | i0 | 58.9 | 3.9364161849711 | 56 | 23 | 97.1 | 0 | 173 | 6 | 80 | 135 | WP_122626647.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Lucifera butyrica] | diamond | 681 | 79.3 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Lucifera | Lucifera butyrica | ||
| 31548404 | 31548404 | PRJNA767802_P_NODE_3376_length_481_cov_10.043981_g3304_i0 | PRJNA767802 | 3376 | 481 | 10.043981 | 48.31154861 | root | 1 | Root_unresolved | Root_unresolved | 125 | 1.78e-32 | NR | MCK9471944.1 | 1903720 | g3304 | i0 | 59.8 | 3.54261954261954 | 97 | 39 | 60.5 | 0 | 481 | 191 | 120 | 216 | MCK9471944.1 hypothetical protein [Bacilli bacterium] | diamond | 1704 | 126 | 0.992063492063492 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 32202944 | 32202944 | PRJNA767802_P_NODE_13438_length_188_cov_0.928058_g13365_i0 | PRJNA767802 | 13438 | 188 | 0.928058 | 1.74474904 | Lacticaseibacillus paracasei | 1597 | Bacteria | Bacteria | 117 | 1.19e-32 | NR | MFK5282332.1 | 1597 | g13365 | i0 | 98.2 | 0.877659574468085 | 55 | 1 | 87.8 | 0 | 22 | 186 | 1 | 55 | MFK5282332.1 hypothetical protein [Lacticaseibacillus paracasei] | diamond | 165 | 117 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus paracasei | ||
| 32676778 | 32676778 | PRJNA767802_P_NODE_17880_length_163_cov_0.894737_g17807_i0 | PRJNA767802 | 17880 | 163 | 0.894737 | 1.45842131 | Erysipelotrichaceae bacterium | 2049044 | Bacteria | Bacteria | 53.9 | 1.43e-6 | NR | MBQ1341607.1 | 2049044 | g17807 | i0 | 60.4 | 0.883435582822086 | 48 | 18 | 88.3 | 1 | 16 | 159 | 1 | 47 | MBQ1341607.1 DUF2213 domain-containing protein [Erysipelotrichaceae bacterium] | diamond | 144 | 53.9 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelotrichaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;