RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA767802" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA767802 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27884062 27884062 PRJNA767802_P_NODE_5405_length_348_cov_1.575251_g5332_i0 PRJNA767802 5405 348 1.575251 5.48187348 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 80.5 2.98e-16   NR XP_003885373.1 572307 g5332 i0 43.8 4.93965517241379 89 43 70.7 1 10 255 4 92 XP_003885373.1 hypothetical protein NCLIV_057680 [Neospora caninum Liverpool] diamond 1719 81.3 0.990159901599016 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
28799509 28799509 PRJNA767802_P_NODE_5707_length_336_cov_2.202091_g5634_i0 PRJNA767802 5707 336 2.202091 7.39902576 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 122 1.59e-33   NR XP_003884403.1 572307 g5634 i0 57.7 1.73214285714286 97 41 86.6 0 335 45 19 115 XP_003884403.1 hypothetical protein NCLIV_048030 [Neospora caninum Liverpool] diamond 582 122 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;